Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00069 ATGGGTCGGCACCTTTTATTTGCATTCTTCATTATTGCATTATTCATAGACTCCACCTCACTCGTATCCCCTGCACCCAATGGCCCTGCCCCTGAAGGTAACTGTGTGTTGAATTCCAACAACACATACCCATATGTGTCATTTGGTGAGTGTGGGGATGTGAAAGAGGACATTAGCAAGTGGGGTGGGGATGGTTTCCCTACCACTCTGTGCTGTCGTAATGCTCTGACTGTTCTGTCATACGCCCTGGCCTTGCAAGTCCGTAACTCAACGGGACAAGTCTTTGTTTCCCAAGATCAATGGCAGAGTTGTAGCCAGTTATTTCATCAGCAACAAGGGATGTCACCATCTTCATGTGGCTTTGACACCTTGTACTACGGGAGCTCCAAATGTTCTAACATCGTTTTGCAGGATGTTCGTGGCATACAGGAGTACCAAGATGCATTGAACAAATGTGAACACTTTGACCATCCATTTTATCAGTCATGTGCAGATTGTACCAGTGCAATATTGAGTGTGAGAGATAGTTTATATGATCAAATGGGAGACAACAATAATGCTACTGAGAGAGCCATATGTGGAGTAGCAACTCTTATTGCTGTTGCAGCTGACAAATCTGATGACCCTTCCCTCATTGACAAATTCTTGCGCTGCTTGCCAACTCCAGCAACAGGAAGAAACACGAGATCATTGGCAAAACTTGTGTTTAGTGTGCTGGTAGGTGTTCTTGCAGTATTGCTTCTTGTTTTTCTGGTGAAATGTGTGTCCAAGAAGAAGCCTCGTAAGCCAGCTCACTTGAAAGAGATCACTACCTGGTCTGGACTACGGTTCTCAAAATCTGAAATTGAGAAGGCATTGAATTATGGCAATGAAAAGATAAGCCTTGGACGTGGGAGTGCAGGCCAAGTGTACAAAGGTGTTCTCCCTAGTGGTCAAGTTGTGGCAATCAAGCATTTAACAAAGAGCAACAACTCTGATTCTTTCACTCGAGAAGTTGAAGGTCTTTCAAGGCTTCGTCACCCAAACCTGGTTTGTCTATTCGGCTGTTGCATGGAAGATGGTGAGAGATATTTAGTCTATGAATATTGTGCAAATGGAAATCTAGCTCAACATCTCTTGAGAAAAGACAGCCGTTTGACATGGGAAACAAGAGTCCAAATTTTGAGAGATTGTTCATTTGCGCTCAAGTATCTGCACCATCATATAGGAGGTTGTGTTGTCCATAGAGATATTAAGCTCACCAACATCCTTTTGACTGAGAATTACGAAGCCAAACTGTCAGATTTTGGACTGGCAAAGATGATGGGGATGGAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGGTACATGGATCCAGAGTACATGAGTAATGCCAAGCTAACATGTGCTAGTGATATATACAGTTTTGGCATTGTTGCTTTACAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAGCTCACTAGGAAGGCAAGAGATGTAAGTATGGGAAAGCGTCCACTGTTGGATTTTGAAGACCCACGGCTAAATGGACAAGTTGATAAGGCTGACTTTGAAGCCATCTTACAGATTGCAGTGCTTTGTGTTGCCAAATCAAGCAAAGGTCGCCCAACCATTGAGGTTGTTTTTGATGAACTGGACAAGGTCTACAGGGATATGAAATCAAGGGAGAAGGCAAAACAAGATTCGTGCTTATCGACAACATCCACCTCCAGCTCCAAGTCTCCAAAGACTCCTTCCTCCTCCTCTTTGACATAA 1785 0.4347 MGRHLLFAFFIIALFIDSTSLVSPAPNGPAPEGNCVLNSNNTYPYVSFGECGDVKEDISKWGGDGFPTTLCCRNALTVLSYALALQVRNSTGQVFVSQDQWQSCSQLFHQQQGMSPSSCGFDTLYYGSSKCSNIVLQDVRGIQEYQDALNKCEHFDHPFYQSCADCTSAILSVRDSLYDQMGDNNNATERAICGVATLIAVAADKSDDPSLIDKFLRCLPTPATGRNTRSLAKLVFSVLVGVLAVLLLVFLVKCVSKKKPRKPAHLKEITTWSGLRFSKSEIEKALNYGNEKISLGRGSAGQVYKGVLPSGQVVAIKHLTKSNNSDSFTREVEGLSRLRHPNLVCLFGCCMEDGERYLVYEYCANGNLAQHLLRKDSRLTWETRVQILRDCSFALKYLHHHIGGCVVHRDIKLTNILLTENYEAKLSDFGLAKMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPLLDFEDPRLNGQVDKADFEAILQIAVLCVAKSSKGRPTIEVVFDELDKVYRDMKSREKAKQDSCLSTTSTSSSKSPKTPSSSSLT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00069 594 ProSiteProfiles Protein kinase domain profile. 289 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi172g00069 594 FunFam probable receptor-like protein kinase At5g59700 363 574 - -
Sebi172g00069 594 MobiDBLite consensus disorder prediction 563 594 - -
Sebi172g00069 594 SMART serkin_6 289 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi172g00069 594 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 86 592 - -
Sebi172g00069 594 SUPERFAMILY Protein kinase-like (PK-like) 267 554 IPR011009 -
Sebi172g00069 594 MobiDBLite consensus disorder prediction 571 594 - -
Sebi172g00069 594 Gene3D Transferase(Phosphotransferase) domain 1 363 583 - -
Sebi172g00069 594 Gene3D Phosphorylase Kinase; domain 1 251 362 - -
Sebi172g00069 594 Pfam Protein kinase domain 294 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi172g00069 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Sebi172g00069 594 Pfam SPARK 31 188 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00069 Sebi-Chr172 734761 737880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00069 260 552 Receptor kinase-like Gene Family AT3G19300 39.130 3.66e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Sebi172g00069 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00069 - - gmx:100807158 811.986