Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00065 ATGGATAAATCTCACATGCCTGAATTTTTCACCTCCCAACACCATTGGTATTCATCCACCATTAGTTCCCTCAAAACAATACACTCCACCTCTTCAGATGAAAATGACAACCCCTCCATTATGTACTCTTATGACAATGCACTTCATGGGTTCAGTGTTGCCTTGTTACCAGAAGAGTTAGAGATTTTAAAGCAAACCCCAGGTTTCATCTCAGCATATAGTGACAGAGCAGCCATGCTTGACACCACCCAGACTTATGGATTCCTCTCTCTCAACCATTCCCATGGCCTTTGGCCTGCTTCCAATTATGGTGAAAATGTCATTGTTGGCATCATTGATTCTGGAATTTGGCCAGAGAGTGATAGCTTCAAAGACAATGGCATGATGAATGCTTCAAAAATTCCTTCACGGTGGAAGGGAACATGTGAGGGTGGACAAGAATTTGATCCTTCCCTATGTAACTCCAAACTCATAGGAGCAAGACACTTCAATAAGGGTGTTTTTGCTGCTCAAGGTAGTAACACTAAAATTGGCATGAACTCTGTTAGAGACACAATGGGACATGGAACTCACACTTCCTCTACAGTTGCTGGAAACTATGTAAAGGGTGCATCTTTTTTTGGTTATGCTAAAGGCACAGCCAGAGGAATTGCACCACGTGCAAGGATAGCTATGTACAAGGTTGCATGGCCTGAAGGAATATACGCCTCTGATGTTCTTGCAGGTATTGATCAAGCAATTGCTGATGGGGTTGATGTTATTTCTATCTCAATGGGGTTTGATAGGGTGCCTTTGTATGAGGACCCTGTAGCTATAGCTGCTTTTTCTGCTATGGAGAAAGGTGTGGTGGTTTCAACCTCAGCAGGAAACTCAGGTCCAGCATTAGGGTCCTTACACAATGGGATTCCGTGGGTTTTAACAGTTGGAGCAAGCAACACAGAGCGTTCTTTTGGAGGTACTTTAACTCTTGGAAACGGGAAGAGCTATGTGGGGTGGACATTGTTCCCAGCAAGTGCCACAGTAAATGAGCTTGCTCTAGTTTACCATAAGAACATTTCAGCATGTGATTCTCCTAAACTATTATCACAAGTAGCAGGTGGCAGCATTGTTATATGTGATCCTGTTATGGATGTTAAGGAGCAGATTGAACATGTGTCAGAGTCTGAAGTGTATGGAGCTATATTTATCTCCAGTGATCCTAGTCTCTTTGAAATGGGAAGAAGAATGACATGTCCTGGTGTTGTGATTAGTACTAAAGATGGAGAAGGTGTAATACAATATGCACAAAGGACAAGACACCCTTCAGCTACCATAAAGTTTCAACAAACCATTGTAGGAAAAAAACATGCTCCCACAGTGGCTACTTACAGTTCAAGAGGGCCTTCGTGGGGTTGTCCATCAATATTGAAGCCAGATGTGATGGCACCTGGATCATCAATTCTTGCAGCTTGGATTCCAGATTCACCTGTTGCACAAATTGGCTCAAATGTGTTTTTGAGTAATGAACACAGTTTGTTGACAGGGACTTCCATGGCTTGTCCTCATGCTTCTGGGGTAGTGGCTCTCTTGAAAAATGCACACCCAGAATGGAGTGCTTCTGCTATTAGATCTGCACTCACAACCACAGCCAACTCATTGGATAATACTGGAAAGCCTGTTGAAGAGAATGGTGAGTTTCCTCAACCAGCTTCTCCTCTTGCAATGGGAGCTGGTCAAATTGATCCTAATCAAGCTCTTGATCCAGGTTTGGTTTATGATGCCACACCTCAAGATTATGTCAAACTCCTTTGTGCTATGAATTTTACCAAAAGCCAAATCTTAGCCATTACTAGATCAAGAGGCTATAATTGCTCAAACTCATCATCTTATGACCTCAATTACCCATCTTTCTTAGCTTTCTATGTCAATGAGAGTGTAGCAGTGGAGAGAAAATTCCGGAGAACTGTGACAAACGTTGGAGATGGTCCAGCTGTTTACACTGCCAGGGTGAGCTCTTCAAATGGCACCACAATCACCGTGTCTCCCAATAAGCTGGTTTTCAAGAGAAAATATGAGAAACGGAGCTTCACTTTGACATTGAAGTCTCAAATGGACAAGAAACGTGTTGTGGCTTATGGTGCACTCGAATGGGTTGAAGAAAGAGGAAGGCATCTTGTTAGGAGTCCCATTGTGGTGGCACCAATGAACGCTATCTTAAACTCCGAAATAGAAAGTGGGATTTAG 2223 0.4291 MDKSHMPEFFTSQHHWYSSTISSLKTIHSTSSDENDNPSIMYSYDNALHGFSVALLPEELEILKQTPGFISAYSDRAAMLDTTQTYGFLSLNHSHGLWPASNYGENVIVGIIDSGIWPESDSFKDNGMMNASKIPSRWKGTCEGGQEFDPSLCNSKLIGARHFNKGVFAAQGSNTKIGMNSVRDTMGHGTHTSSTVAGNYVKGASFFGYAKGTARGIAPRARIAMYKVAWPEGIYASDVLAGIDQAIADGVDVISISMGFDRVPLYEDPVAIAAFSAMEKGVVVSTSAGNSGPALGSLHNGIPWVLTVGASNTERSFGGTLTLGNGKSYVGWTLFPASATVNELALVYHKNISACDSPKLLSQVAGGSIVICDPVMDVKEQIEHVSESEVYGAIFISSDPSLFEMGRRMTCPGVVISTKDGEGVIQYAQRTRHPSATIKFQQTIVGKKHAPTVATYSSRGPSWGCPSILKPDVMAPGSSILAAWIPDSPVAQIGSNVFLSNEHSLLTGTSMACPHASGVVALLKNAHPEWSASAIRSALTTTANSLDNTGKPVEENGEFPQPASPLAMGAGQIDPNQALDPGLVYDATPQDYVKLLCAMNFTKSQILAITRSRGYNCSNSSSYDLNYPSFLAFYVNESVAVERKFRRTVTNVGDGPAVYTARVSSSNGTTITVSPNKLVFKRKYEKRSFTLTLKSQMDKKRVVAYGALEWVEERGRHLVRSPIVVAPMNAILNSEIESGI 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00065 740 PRINTS Subtilisin serine protease family (S8) signature 507 523 IPR015500 -
Sebi172g00065 740 PRINTS Subtilisin serine protease family (S8) signature 104 123 IPR015500 -
Sebi172g00065 740 PRINTS Subtilisin serine protease family (S8) signature 184 197 IPR015500 -
Sebi172g00065 740 SUPERFAMILY Subtilisin-like 83 583 IPR036852 GO:0004252|GO:0006508
Sebi172g00065 740 Pfam Fibronectin type-III domain 624 725 IPR041469 -
Sebi172g00065 740 CDD PA_subtilisin_like 320 438 - -
Sebi172g00065 740 ProSitePatterns Serine proteases, subtilase family, serine active site. 508 518 IPR023828 -
Sebi172g00065 740 Gene3D - 596 727 - -
Sebi172g00065 740 CDD Peptidases_S8_3 80 544 IPR034197 -
Sebi172g00065 740 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 725 IPR045051 -
Sebi172g00065 740 Gene3D - 314 445 - -
Sebi172g00065 740 Pfam Subtilase family 104 548 IPR000209 GO:0006508|GO:0008236
Sebi172g00065 740 ProSiteProfiles Serine proteases, subtilase domain profile. 85 579 - -
Sebi172g00065 740 Pfam Peptidase inhibitor I9 10 76 IPR010259 -
Sebi172g00065 740 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 80 IPR037045 -
Sebi172g00065 740 FunFam Subtilisin-like protease SBT1.5 106 323 - -
Sebi172g00065 740 Gene3D Peptidase S8/S53 domain 106 592 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00065 Sebi-Chr172 705942 708164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00065 1 726 Subtilisin-like Serine Gene Family AT5G67090 42.318 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00065 - - ccaj:109796640 1112.44