Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00033 ATGGAGGAAGATGAACATAATGACAATGAGTGGAGAGAAAGCCATGAGAATTGTGAGGGAATGAGTAATTTATCTGAACATAAGGAAGATGAGAATGATGGAAATGAAAATGAGGGAAGCGAAAATGAATTGAGTGAACACATTTGTATTGATAACTTCCAGGACATTGTTAAAAACAATCTTGTATCTAAAAGTCCTGAGCAGATTATGTTGAAGTATGATTTTGTGAGTCTTGAAATGGCTTATGTGTTTTATAGTTGGTATGGGAGGTTTAACGGGTTTGCTGTTCGAAAAAGCAAGATAAGTTATAATTGTCGGAAGGAAATTGTTGGTCGTGACTTTTTGTGCAACAAAGAAGGCAAACGGAGAAAACGAAATGATGATAGTGATTCAGAAGAAGATCCCGAACGAGAGCCTAAACCACAGACTAGGTGTGAGTGTAAAGCTAAATTTCGTGTGCATGTTGATTTTAATTCACGTTGGTGGTATGTGACGTGTTTTGACAATAGACATAATCATGAGCTGCTGGATGAAAAGTTTTTTGGTATGCTACCAGCTCATAGAAATATGAGCGAAGGGGATATTATAGAGATGAATAATATGTTAAAGGATGGTATAGGGGCTCCACAAATTTATAATTCATTTGCAAGCCAAGCAGGAGGGTATGAAAAGGTTGGTTTCTGGAAGAAAGACATGTACAACGAAATTGATAAACAAAGGAAGTTACGAAATGGTGATACCATGGCTGCGTTAGAATATCTAGGAGGTGATATTGAAATTCGTGACTTTCAACGAAAGTGGAGTGATATGGTGAAAAAGTGTAATGTGGAGGAGCATCGATGGGTCATTGAGATGTATGAACGGAGGAAAATGTGGGCCACATGCTACATTCGGGGGAACTTTTTTGCAGGATTTAGGATCACATCACGGTGCGAGGGTCTACATTCTGAAGTTGGGAAGTTCATTAATTCAAGATTGAGTTTGTGTGAGTTTTTGCAACATTACTATTGCTGTTTGACTCACATGCGTTACAAGGAAGTGCAAGATGACTTCAAATCAGTGCATGGTGAGCCTGTTGTGCGTACTAGTTTATCTTCACTTGAGAAGTCTGCTAGCAAAGTTTATACCAGGGAAGTGTTTCGTCTTTTCCGTTCTGTGTTAGAGAGGGCAGCCCATGTGAAAGTTGTTCGGTGGAAAAAAAAGTTCCCATGCTTCATTTACACTGTTTCAAAGTATAGAAAAGTAGGGAGGGAGTGGAATGTGACATTCTACCCTGCTGAAAGTGTTTACAAATGTTCTTGTATGAGAATGGAATCAATTGGGCTTCCATGTGACCATATAATTGGGGTGTTGGTTTACCAAGATATTTCAGAATTACCTAGAGCCTTAGTACTTGATCGATGGTCAAAGGATGCAAAGTTGGGACTTCATGGTATGAATGGTAATGGATTTAATTTCTGTGACCCTCAATTGACAGCTAGATATTGGGCTTTGATGCACAGGTTTAGGGATGTGGCACGTGAAGCTTATGAAAATTTGGAAGATTACCATGATGCAGATGAGAATGCCATTAGTTTCCTTGCCCAGCTGAAAGAAAAGAAGGCAAGGAGGAGTGGTGGAGATGCAACTGTCGTGGTTAATGAAAATAATAATGTGGGGGATCCTTTACGGGCTAGAACAAAAGGAGCAGGTGGTGGAAGGTCAACACAAGCAGGAACAAGAAGGAGGCGTCCTCATCATTGCCGTAAATGTAAAGTTGCAGGGCACAATATTAATACTTGCCCTTTACTGCGAACATCAAGTTCCCAACCAGTACATGTAACAAGAGGTGCTTCTATAGATAGTGATAATGCAAAAGAAGTCATAGTAAGGGATACGGAAAATAACATGGACACAAGTGACATGTATTGGTCACCTATAGGTGACAACTACTGA 1935 0.3969 MEEDEHNDNEWRESHENCEGMSNLSEHKEDENDGNENEGSENELSEHICIDNFQDIVKNNLVSKSPEQIMLKYDFVSLEMAYVFYSWYGRFNGFAVRKSKISYNCRKEIVGRDFLCNKEGKRRKRNDDSDSEEDPEREPKPQTRCECKAKFRVHVDFNSRWWYVTCFDNRHNHELLDEKFFGMLPAHRNMSEGDIIEMNNMLKDGIGAPQIYNSFASQAGGYEKVGFWKKDMYNEIDKQRKLRNGDTMAALEYLGGDIEIRDFQRKWSDMVKKCNVEEHRWVIEMYERRKMWATCYIRGNFFAGFRITSRCEGLHSEVGKFINSRLSLCEFLQHYYCCLTHMRYKEVQDDFKSVHGEPVVRTSLSSLEKSASKVYTREVFRLFRSVLERAAHVKVVRWKKKFPCFIYTVSKYRKVGREWNVTFYPAESVYKCSCMRMESIGLPCDHIIGVLVYQDISELPRALVLDRWSKDAKLGLHGMNGNGFNFCDPQLTARYWALMHRFRDVAREAYENLEDYHDADENAISFLAQLKEKKARRSGGDATVVVNENNNVGDPLRARTKGAGGGRSTQAGTRRRRPHHCRKCKVAGHNINTCPLLRTSSSQPVHVTRGASIDSDNAKEVIVRDTENNMDTSDMYWSPIGDNY 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00033 644 MobiDBLite consensus disorder prediction 121 143 - -
Sebi172g00033 644 SMART 26again6 430 457 IPR006564 GO:0008270
Sebi172g00033 644 MobiDBLite consensus disorder prediction 1 43 - -
Sebi172g00033 644 MobiDBLite consensus disorder prediction 545 579 - -
Sebi172g00033 644 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 193 IPR031052 GO:0006355
Sebi172g00033 644 Pfam FAR1 DNA-binding domain 84 176 IPR004330 -
Sebi172g00033 644 ProSiteProfiles Zinc finger SWIM-type profile. 407 455 IPR007527 GO:0008270
Sebi172g00033 644 MobiDBLite consensus disorder prediction 8 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi172g00033 Sebi-Chr172 388880 391353 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi172g00033 FAR1 7.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00033 - - tpra:123913749 319.701