Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi172g00031 ATGGAAGAGACCACCAAGAGGAAACATGTTACTCTTATCAATGAACTAATCCAAGGAAAGGAGCTAGTAAATCAGCTCAGTAGCCATCTTGTCTCTTCTCCATCATCCCATCAAACCAATGAATTCTTGATTGAGCAAATACTTTCATCCTACGAGAAAGCAATATCCATGCTCAACTCTGTGTCTAATGTGGGAGTGGGTGGGATTATGACCCCCAATGGCAACATCATGGATTCCCATTGCTCTGATGGGAGCCCCAGAAGTGAGGTCATGGACCTTGAATTTGAGCACAAAGCTGTCTTCAAGAAAAGAAAGACCATGCCTAGATGGACAGAGCAAGTGAAGATTTGCTCAAAAACAGGACTTGAAGGATCATTGGATGATGGATATAGCTGGAGAAAATATGGGCAAAAGGATATTCTTGGAGCTAAGTTTCCCAGAGGATATTACAGATGCACACATAGAAATGTACAAGGATGTCTGGCAACAAAGCAAGTTCAAAGGTCAGATGAAGACCCAACAATAATTGAGGTGACCTACAGAGGAAGACACACATGCAAGCAAACTAAGAATTTAAACAAGGAGTTTCCATCAAAAATGAAGATTTGTTTAGGGGAAAATCAACTCCACAATGATCAAAAGAATCAACTACTATTGCAGGAGAAAATGGAACAAACCCCAGAGACAATTTTCCCATTTAAAGCAGAGCTTGAAGCCAAAACAGAGGACTTGGAAACCAAGGAGGATATCTTCCCTTGGCTTTGCTTTCAATCTCCATCAATTGGATCAAAAAACGAGGACAATAACATATTATCAGAGACCATGATGGAAAACCATTTCATGGAAAGCTTTTCCCCTGCATTCATATCTTCAGAATCAAACCTTCTCTGTTTGTCAGCATACCACTTGGGCAGCACTAGACTAAGCCAAAACGTACAACCCTCAGAATCTGATATCACTGAGATAATTGCAGCCCCAACTTCAGTCACCAATTCCCCAATTCTGGATTTGGATATCTTACTACATAAAGGTGATTTCGACACGGATTTCCCTTTCAACATCCCTGAATATTTCTCTTCATGA 1083 0.4063 MEETTKRKHVTLINELIQGKELVNQLSSHLVSSPSSHQTNEFLIEQILSSYEKAISMLNSVSNVGVGGIMTPNGNIMDSHCSDGSPRSEVMDLEFEHKAVFKKRKTMPRWTEQVKICSKTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTIIEVTYRGRHTCKQTKNLNKEFPSKMKICLGENQLHNDQKNQLLLQEKMEQTPETIFPFKAELEAKTEDLETKEDIFPWLCFQSPSIGSKNEDNNILSETMMENHFMESFSPAFISSESNLLCLSAYHLGSTRLSQNVQPSESDITEIIAAPTSVTNSPILDLDILLHKGDFDTDFPFNIPEYFSS 360
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi172g00031 360 Gene3D WRKY domain 112 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi172g00031 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 300 IPR044810 GO:0003700
Sebi172g00031 360 Pfam WRKY DNA -binding domain 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi172g00031 360 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi172g00031 360 FunFam WRKY transcription factor 53 112 189 - -
Sebi172g00031 360 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi172g00031 360 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi172g00031 Sebi-Chr172 380186 382226 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi172g00031 11 251 WRKY Transcription Factor Family AT4G23810 40.221 3.88e-52 174
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi172g00031 WRKY 3e-27 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi172g00031 - - gmx:100790050 534.258