Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi171g00062 ATGGCAAGTATTTCTATCGATGATGTAAAAGTTATTTGTTTCAATAATGAGGAGGAGCATGTAGCTGATAATGTTGTGGAGAAAGAAAATGTTGTTGGGTATGTGGAAAATGTTGTTTCTAATATGGAGCAAGATGCTGAAACTAGTTACCACTTGTGTAAGAAAAATGTAGGAGCTATTAATTTTGAAGGTGGTGGTTCTAGTAATGAAGTTGAGACATCAAGAGATATGCAAGAGAATGAGATGCATGGGTTTAGCTTACTAGAAGAGTTTAAGGTGGATTGTGGGTCTGAATTGCAGAGCATTGAATTTTGTACATTAACACCTATTGATGTGATGAAGTACCATTTTGCTAATCTTGATCTGGCTGATGAATTCTATCATGAGTATGCAAAAAATAAGGGCTTTGCTATCCGGAAAAGCAAGGTGGGAAGGAACAAGGAACGAAATTTGGTAAGAAAGACTTTTTTGTGCTTTAAGGAGGGCTTTAGACAAAAGAAGCACTTAAACAGGGTAGATCGGAAGCATGAGGCAAAACCTTTGACTCGTTGTGGGTGTAACGCAAGAATTCGGGTCCGTCTCGATCCTGGAAGTAACCGATGGTGTGTGAAATTCTTTTCTGATGAACACAACCATGAGCTTTTGTCAGACAAATATGTCGGAATGCTAGCTGGACATAGAAAAATGAAAGAATCTGATATATTGCAAATGAAGAACTTAAGAGATGTTGGGATCAGCACGCCATACATTTTTGGCTCTTTTGTGAAACAATCTGGAGGATTTAAGAATGTTGACTTCAATAAAAGAGACATGTATAATCAAATTAAGAAAGAAAGGCGCACTCAAGCAATCAATGCAAAAGCAGCCATAACATACATCAATCGACTGCGTGTTAATGATCCTACATTCTATTTTATCCACATAGCTGATGGTGAAGGCAGGTTGGAAAATCCGTTTTGGGCAGAATCCATTAGCCAAGTTGATTATCACATTTTTGGAGACGTGCTAGCTTTTGATGCCACGTATCGCCGTAACAAATATATGTGTCCACTGGTAGTGTTTTCAGGAGTGAACCATCACTCCTCATTAGGGACACCTCTAGGACTTCAAGAAACATTTTTCCACATTTAG 1131 0.3828 MASISIDDVKVICFNNEEEHVADNVVEKENVVGYVENVVSNMEQDAETSYHLCKKNVGAINFEGGGSSNEVETSRDMQENEMHGFSLLEEFKVDCGSELQSIEFCTLTPIDVMKYHFANLDLADEFYHEYAKNKGFAIRKSKVGRNKERNLVRKTFLCFKEGFRQKKHLNRVDRKHEAKPLTRCGCNARIRVRLDPGSNRWCVKFFSDEHNHELLSDKYVGMLAGHRKMKESDILQMKNLRDVGISTPYIFGSFVKQSGGFKNVDFNKRDMYNQIKKERRTQAINAKAAITYINRLRVNDPTFYFIHIADGEGRLENPFWAESISQVDYHIFGDVLAFDATYRRNKYMCPLVVFSGVNHHSSLGTPLGLQETFFHI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi171g00062 376 PANTHER OS01G0519700 PROTEIN 115 355 - -
Sebi171g00062 376 Pfam FAR1 DNA-binding domain 125 215 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi171g00062 Sebi-Chr171 1617714 1618945 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi171g00062 FAR1 5.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi171g00062 - - tpra:123905832 281.952