Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi171g00034 ATGCGCCTTGTGATTCCTAAGACTCAGGAGACTGATGCTGGGTTTGATGATTTAATGGAGCTCATTTTCTGGAGCTGTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGCTTGCCTGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTATTATAATCTTAACAGCATTCTTGACAGAGAAGTCAATTGAGTTCATGATTAGGTTTCCAGGGCTGGAAATCTTTCTTCTTATGGAAGTCTCATGGGGGATGCCTTTGGAAAATATGGAAAAGCTCTGTGGAGATATGTGTTGTGATGTGATTTCTGGAACATCTTCAAGTGGAATTCATCACTCTGGTGTCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTCTTGTTGTTATAACATTTGCTGTATTTGCACCCTTTGATTCATTGAGATTCACATCTGCATTATCAGTTGGACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTGAGATGCCCAGACTCTTCCCGATCATTACTGATGCAGTGTCAGTTTTTGAATTGTTCACTGTGGTTCCTGTGCTTGTGACCGCCTATATCTGCCACTACAATGTTCACAGCATAGATAATGAACTTGAGGACTCTTCATGGATGCATGGGGTTGTACGTACCTCCCTTGCTCTGTGCTCTTCAGTGTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGAAACTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTTAATGATGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTATTTTCAGTAGTCTTCTATGCAGTGAGGGTCAACATAGATAGTCTCATATTTTCTTCATCAAGGCCTTTGGTTCTAGACAACTTCAGATTTGCATCAATTACTATTGTCCTTGTTGGCATTATCTTCCTGGGAGCAAATTTCATACCAAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCAGCTGCCGTCACTCTTAGGGACCGGTACAACATAGCAACTAAAGAGACAAGATTCTATCTGTCTTTATGA 1164 0.4167 MRLVIPKTQETDAGFDDLMELIFWSCFNLSTTIIGAGIMGLPACVKKLGMVPGLLIIILTAFLTEKSIEFMIRFPGLEIFLLMEVSWGMPLENMEKLCGDMCCDVISGTSSSGIHHSGVLEGWFGVHWWTGRTFVLVVITFAVFAPFDSLRFTSALSVGLAVVFLVIAVGISIVKIISGGIEMPRLFPIITDAVSVFELFTVVPVLVTAYICHYNVHSIDNELEDSSWMHGVVRTSLALCSSVYLLTSFFGFLLFGEETLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFSVVFYAVRVNIDSLIFSSSRPLVLDNFRFASITIVLVGIIFLGANFIPSIWDIFQFTGATAAVCVGFIFPAAVTLRDRYNIATKETRFYLSL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi171g00034 387 Pfam Transmembrane amino acid transporter protein 133 371 IPR013057 -
Sebi171g00034 387 Pfam Transmembrane amino acid transporter protein 25 72 IPR013057 -
Sebi171g00034 387 PANTHER AMINO ACID TRANSPORTER 25 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi171g00034 Sebi-Chr171 743807 746802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi171g00034 25 382 Amino Acid or Auxin Permease AAAP Family AT5G38820 60.363 8.36e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi171g00034 K14207 - gmx:100791286 533.102