Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi171g00006 ATGCTCAAAACGCTTGAAAGGTACCAAAAGTGCAGCTATGGTGCAGTTGAAGTCAGCAAACCTGCAAAAGAGCTTGAGAGCAGCTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACCCAGAGAAACCTTCTAGGTGAAGACTTGGGCCCATTGAATACCAAAGATCTTGAGCAGCTTGAGCGCCAACTGGATTCATCTCTTAAGCAAGTGAGGTCCACAAAGACCCAATTCATGCTGGACCAGTTAGCTGATCTTCAAAATAAGGAGCAGATGTTGGTAGAAGCAAACAGAGCTTTGACCATGAAGCTGGATGAAATCAATTCAAGAAACCAGTATAGGCAAACATGGGAAGCGGGTGATCAAAGTATGGCATATGGTGCACAGAATGCTCACTCTCAAGGCTTCTTCCAGCCTTTGGAGTGCAATCCCACATTGCAGATAGGCCCTGACTACAGGTACAGTCCTGTAGCCTCAGATCAGCTAACTGCCACAACTCAAGCTCAACAAGTGAATGGCTTTATTCCAGGATGGATGCTTTGA 558 0.4552 MLKTLERYQKCSYGAVEVSKPAKELESSYREYLKLKARFESLQRTQRNLLGEDLGPLNTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEQMLVEANRALTMKLDEINSRNQYRQTWEAGDQSMAYGAQNAHSQGFFQPLECNPTLQIGPDYRYSPVASDQLTATTQAQQVNGFIPGWML 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi171g00006 185 Pfam K-box region 23 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi171g00006 185 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Sebi171g00006 185 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi171g00006 Sebi-Chr171 94600 97023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi171g00006 1 185 MADS-box Gene Family AT5G15800 67.500 1.14e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi171g00006 K09264 - gmx:100785322 345.895