Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00167 ATGAAAAACTCAAACACTACCAGTGATTCATCAAAACTCGATCGCAAAACTATCGAAAGGAACCGCAGAATTCACATGAAATCTCTCTGCTTCAAGCTTATTTCTATTATCCCTTCTAAGTACCTCAAACCCTCCAAGGACATGCTTTCACAGCAGGACCAGCTGGATCTAGCAGCCACTTATATAAAGCATCTGAGAGAAAGAATAGAAAAACTGAAGGGGAAAAAGGAGCAAACCATGAGCATGATGAGCTCAAACCAAAACAACAACAATAATAGGATTTTCAATATTGGCTCAAAATTGCCAATACTTGAGATAAGAGACTTGGGTTCTGGTATTGAAGTGATGTTGATAAGTGGATTGAACAAGAACTTCATGCTCTATGAAATAATTGGTGTCCTTGAGGAAGAAGGTGCTGAAGTTGTCACTGCAAATTTCTCTACCATTGCTGATAAGATCTTTTACACTGTTCATGCACAGGTTAAGATATCAAGAGTTGGTGTTGAGCCAACAAGGGTGTATCAGAGGCTTCAAGAGTTGATTGCACCACTAGAATGCTGGGACTTGACCGAGACTGGCGGTGCGGCGGTGAGGAAGTTGGGATCCTTTCTGGTTCTCTTTTTCTTTGATACAATGAGAAGTAAAAAAATTTCACTACTCCCTCGTTGTCTCCCGCGCTCGTCCCTCATCGGTGTGTCACCACCTTCTTCTCCTACTGTGTGTCTTCTGCGGTGTGTCATCGGTGTGTCTTCTGCGGCCGTGTCATCTCGTCGGCATTGTGCGACTCTCCTCGTTCATGGCGGCGGTGTGTTACTCTCCTCGTTCTCCGTCTCCAGCGTTGGGGTAGGCGCTGATTTTAGGTGGCAAGCTTGTTTATCAGAGCACCAAGAAGAGGGCTAG 900 0.4467 MKNSNTTSDSSKLDRKTIERNRRIHMKSLCFKLISIIPSKYLKPSKDMLSQQDQLDLAATYIKHLRERIEKLKGKKEQTMSMMSSNQNNNNNRIFNIGSKLPILEIRDLGSGIEVMLISGLNKNFMLYEIIGVLEEEGAEVVTANFSTIADKIFYTVHAQVKISRVGVEPTRVYQRLQELIAPLECWDLTETGGAAVRKLGSFLVLFFFDTMRSKKISLLPRCLPRSSLIGVSPPSSPTVCLLRCVIGVSSAAVSSRRHCATLLVHGGGVLLSSFSVSSVGVGADFRWQACLSEHQEEG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00167 299 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 79 IPR036638 GO:0046983
Sebi16g00167 299 FunFam Transcription factor bHLH162 3 94 - -
Sebi16g00167 299 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 65 IPR011598 GO:0046983
Sebi16g00167 299 Gene3D - 1 94 IPR036638 GO:0046983
Sebi16g00167 299 Pfam Helix-loop-helix DNA-binding domain 15 66 IPR011598 GO:0046983
Sebi16g00167 299 Coils Coil 62 82 - -
Sebi16g00167 299 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 4 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00167 Sebi-Chr16 2640513 2645387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00167 7 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.066 2.00e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi16g00167 HLH 4.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00167 - - vun:114179389 297.36