Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00163 ATGGCAGCTCGCACACTTTCCTGGTTGCTTTCTCGCTCTCGCTCTCTTTCCTCTTCTTCTTCAGGAACTGCTTCTCTGCTTCACTCACTAGGAAAAAAATCTGGAGGGTGGAGAAACATGAACAGGTTTAGCACAGCTGCAGCAGTTGAGGAATTGGTCACACCACAAGTTTCAATAAATTATACACAGCATCTCATTAATGGCCACTTTGTGCATGCTGCATCAGGGAAAACATTTCCAACCTATGACCCACGAACAGGGGAAGTGATTGCTCATGTTGCTGAAGGTGATGTTGAAGATATTGACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCAAAAATGACTGCTTATGAAAGGTGTCGGATATTGCTGCGGTTTGCTGATTTGGTTGAGAAGCACAATGATGAGCTTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCTGCCAAAGCTGAAGTACCAATGTTTGCTCGTTTATTTCGATATTATGCTGGTTGGGCAGATAAAATTCATGGGCTGACTGTCCCAGCTGATGGAGATTATCATGTTCAGACATTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCCTGGAACTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTTTAGCATGTGGTAATACCATTGTCCTTAAGACTGCTGAGCAAACACCTCTAACAGCTCTTGTTGTGGCAAAACTACTTCATGAGGCTGGTCTTCCCCCTGGTGTTCTGAATGTAGTTTCTGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCATTCACTGGGTCAACAGATACTGGAAAAATTGTACTTGAATTGGCTGCCAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAGTATGTGAGGATGCTGATGTTGATCACGCTGTTGAACTTGCACACTTTGCTCTGTTCTTTAATCAGGGGCAATGCTGCTGTGCTGGGTCTCGTACCTTTGTGCATGAGCGTGTCTATGATGAGTTCATAGAGAAAGCAAGGAAACGGGCTTTGAGACGTGTTGTTGGTGATCCATTCAAGAAAGGCGTTGAACAAGGTCCTCAGATTGACACAGAGCAATTTGAGAAAGTCCTTAGGTACATAAGGTCTGGAATTGAAAGCAGTGCTACCCTAGAGTGTGGGGGTGATAGATTGGGCTCAAAAGGCTTCTTTGTCCAGCCAACTGTCTTCTCAAATGTTAAGGATGATATGCTGATAGCACAAGATGAAATCTTTGGTCCAGTTCAGTCCATCTTGAAATTCAAGGACATTGATGAAGTAATACGACGGGCAAATACTACACGTTATGGTCTAGCCGCAGGTGTGTTCACCAAGAGTGTGAACACAGCCAACACTTTGATGCGGGCACTGAGAGCTGGAACTGTGTGGGTTAATTGCTTTGATGTTTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGCATAGGCAGGGAGAAAGGAATCTACAGTCTTCACAACTACCTGCAGGTGAAAGCTGTTGTCTCACCATTGAAGAATCCTGCGTGGCTGTAG 1629 0.4512 MAARTLSWLLSRSRSLSSSSSGTASLLHSLGKKSGGWRNMNRFSTAAAVEELVTPQVSINYTQHLINGHFVHAASGKTFPTYDPRTGEVIAHVAEGDVEDIDRAVSAARKAFDEGPWPKMTAYERCRILLRFADLVEKHNDELAALETWNNGKPYEQAAKAEVPMFARLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALVVAKLLHEAGLPPGVLNVVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDHAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKARKRALRRVVGDPFKKGVEQGPQIDTEQFEKVLRYIRSGIESSATLECGGDRLGSKGFFVQPTVFSNVKDDMLIAQDEIFGPVQSILKFKDIDEVIRRANTTRYGLAAGVFTKSVNTANTLMRALRAGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPLKNPAWL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00163 542 Pfam Aldehyde dehydrogenase family 71 532 IPR015590 GO:0016491
Sebi16g00163 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 76 532 IPR016162 GO:0016491
Sebi16g00163 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Sebi16g00163 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 47 532 - -
Sebi16g00163 542 FunFam Mitochondrial aldehyde dehydrogenase 2 314 503 - -
Sebi16g00163 542 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 66 322 - -
Sebi16g00163 542 SUPERFAMILY ALDH-like 56 535 IPR016161 GO:0016491
Sebi16g00163 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 314 503 IPR016163 GO:0016620
Sebi16g00163 542 CDD ALDH_F2BC 59 533 - -
Sebi16g00163 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Sebi16g00163 542 FunFam Aldehyde dehydrogenase, putative 504 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00163 Sebi-Chr16 2563101 2567613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00163 1 542 Aldehyde Dehydrogenase Gene Family AT3G48000 78.269 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00163 K00128 - qsa:O6P43_030889 963.755