Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00156 ATGGTGGCAAGATCATTCATTAATTTGTCAGACCTGGTGTCAGGGGATTCTTCAAACTTACCTCAAACTCCCAAAGCTCTTCCCCAAGATATAACTGTTCCAGGAGTTATGTTTGATTTAGATGGTGAACAAAGGGATGATAATGATTCTAATGCTGTCTCTTCAGAATACCATCACAAGATCATTGTAGTAGCAAATTTCCTTCCTCTCAATGCTCAAAAAGAGAAAATATCTGGCAGATGGTGCTTTACTTATGATGAGGATTCAATTTTGTTGCAATTAAAGGATGGTCTCTCTCCTGACACCAGCATTGTTTATGTGGGATCTTTGAAGGTTGATGTTGATGCTAGTGAACAAGAGAATGTTTCTCTTAAGTTGCTGGAGGAATTCAATTGCTTGCCAACCTTTATTCCTTCAGACCTCCAGAAACAATTTTATAATGGATTCTGTAAGCAGCATTTGTGGCCTCTATTCCATTACATGTTGCCTATGTCTCCAGACTACTGCAATCGCTTTGATAGGTCACTGTGGCAAGCTTATATTTCTGCTAACAAGATATTTGCAGATAAAGTCATGGAGGTCATTAATCCAGAACATGATTATGTGTGGGTTCATGATTATCATCTTATGCTTCTTGCAACATTTCTGAGGAGGCGATACAGTCAGATCAAACTAGGATTTTTCCACCATAGCCCATTTCCATCCTCTGAAATTTATCGGGCTCTGCCTGTGAGAGATGAAATTTTGAAAGCACTGCTTAATGCTGACTTAATTGGTTTTCATACATTTGATTATGCTCGGCATTTTCTATCTTGCTGCAGTCGACTTCTTGGTGTAAAATATGAAACCAATAGGGGTTACATTAAGCTTGAATACTTTGGCCGTACAATCTTCATTAAAATTTTGCCTGTAGGGATTCATATGGGCCAACTACAATCTGCCTTAAATCACCCTTCTTCTTTAGCCAAAGTCAGAGAAATGTGCAAGAAGTATGAGGGGAAAAAACTTATTCTCGGTGTTGATGATATGGACATGTTTAAAGGTATCAACCTAAAGCTCTTGGCCATGGAACAACTCCTTCAGCAACATCCAGAATTTCAGGGTGAATTAATACTGGTCCAAATTGTAAATCCACCAAGGAGTAACGGTAATGATGTCAAAGAAGAAAGGAAGGAGGCATACATTACTTCGAAAAGGATAAATGAAAGGTTTGGTTTTGAAGGTTATGAGCCTGTCATCATTATTGATCGTCCTGTTCCTTTATATGAGAAGACATCCTACTTTGCTTTAGCAGAATGTTGTGTTGTGAATGCATTGCTGGATGGTATGAATTTGATTCCCTACAAGTACATTGTCTGCAGGCAGGGGAGTCCTATAATGGATGATGCTCTAGAAATTTCTTCTGAGTCCCCTCGTACAAGTGTACTTGTTGTTTCTGAGTTCATAGGTTGCTCACCATCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGATATTAATGCTGTAGCTGATGCATTGAATTTGGCCATCACAATGCCCATTAGAGAGAAACAGTTACGGCATGAGAAGAACTATCAATATGTTAGCTCTCATGATGTAGCTTACTGGGCCCGAAGTTTTATGCAAGATCTACAGTACTCGTGCAAGGATCACTACAGTAAAAATTGCTGGGGGATTGGTTTTGGCCTGAATTTCAGAATTTTGGCCCTTTCTCCTACTTTCAAGAAGCTTTCCGTACGCCACATTGTCCCTGCATATAAAAAAGCAAATTGCAGGGTACTCTTTTTGGACTATGATGGAACAGTTGCAACTCAAGCTTCCAATGCTGAAACCCCCAGTCCTGAAGTCATAAATGTTCTAAAAAACCTTTGCAGTGACCCTAACAACACTGTGTTTATAGTAAGTGGCAGGGGGAAAGACATACTGAGTGCATGGTTTGATCAGTGTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTCTAAGATGGGGTCAACAGTCAACTTGGGAAATGAATCATATAAGTGCAAATTTTTCTTGGAAAAGCATAGCAGAGCCCTTGTTGAGATTGTATACTGAGGCAACAGATGGCTCCGATATAGAGACCAAAGAGAGTGCCTTGGTATGGAACTACCACAATGTCGATCCTGATTTTGGATCTTGGCAAGCCAAGCAGCTGTTGGATCACCTTGAAAGTTTATTGGCAAATGAACCTGTAGTTGTTAAGAAGGGAAAGCATATCATTGAAATCCAGCCACAGGAAGTTCTGTCTACAATGACAAGGAATGGGAAATTGCCAGATTTTGTGCTGAGCATAGGGGATGATAGGTCTGACGAGGACATGTTTGAGGGCTTATTGACTAAAGCTTATGGTGGAACCTCTTCTCCTGCACCTGAAATTTTTTCATGCACTGTTGGTCAAAAACCAAGTAAAGCTAAGTATTACTTAGATGATACTGTGGATGTGAGGAGCTTACTTGAAGCTCTTGCTACCGCTTCAGGGCCTGAATAA 2514 0.4025 MVARSFINLSDLVSGDSSNLPQTPKALPQDITVPGVMFDLDGEQRDDNDSNAVSSEYHHKIIVVANFLPLNAQKEKISGRWCFTYDEDSILLQLKDGLSPDTSIVYVGSLKVDVDASEQENVSLKLLEEFNCLPTFIPSDLQKQFYNGFCKQHLWPLFHYMLPMSPDYCNRFDRSLWQAYISANKIFADKVMEVINPEHDYVWVHDYHLMLLATFLRRRYSQIKLGFFHHSPFPSSEIYRALPVRDEILKALLNADLIGFHTFDYARHFLSCCSRLLGVKYETNRGYIKLEYFGRTIFIKILPVGIHMGQLQSALNHPSSLAKVREMCKKYEGKKLILGVDDMDMFKGINLKLLAMEQLLQQHPEFQGELILVQIVNPPRSNGNDVKEERKEAYITSKRINERFGFEGYEPVIIIDRPVPLYEKTSYFALAECCVVNALLDGMNLIPYKYIVCRQGSPIMDDALEISSESPRTSVLVVSEFIGCSPSLSGAIRVNPWDINAVADALNLAITMPIREKQLRHEKNYQYVSSHDVAYWARSFMQDLQYSCKDHYSKNCWGIGFGLNFRILALSPTFKKLSVRHIVPAYKKANCRVLFLDYDGTVATQASNAETPSPEVINVLKNLCSDPNNTVFIVSGRGKDILSAWFDQCENLGIAAEHGYFLRWGQQSTWEMNHISANFSWKSIAEPLLRLYTEATDGSDIETKESALVWNYHNVDPDFGSWQAKQLLDHLESLLANEPVVVKKGKHIIEIQPQEVLSTMTRNGKLPDFVLSIGDDRSDEDMFEGLLTKAYGGTSSPAPEIFSCTVGQKPSKAKYYLDDTVDVRSLLEALATASGPE 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00156 837 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Sebi16g00156 837 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Sebi16g00156 837 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Sebi16g00156 837 NCBIfam trehalose-phosphatase 592 831 IPR003337 GO:0003824|GO:0005992
Sebi16g00156 837 Gene3D - 722 836 IPR023214 -
Sebi16g00156 837 Gene3D - 591 698 IPR023214 -
Sebi16g00156 837 SUPERFAMILY HAD-like 592 831 IPR036412 -
Sebi16g00156 837 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Sebi16g00156 837 Gene3D Glycogen Phosphorylase B; 52 313 - -
Sebi16g00156 837 Gene3D Glycogen Phosphorylase B; 314 529 - -
Sebi16g00156 837 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 837 - -
Sebi16g00156 837 NCBIfam HAD-IIB family hydrolase 594 784 IPR006379 -
Sebi16g00156 837 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 48 832 IPR001830 GO:0003824|GO:0005992
Sebi16g00156 837 Pfam Trehalose-phosphatase 595 819 IPR003337 GO:0003824|GO:0005992
Sebi16g00156 837 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Sebi16g00156 837 CDD HAD_TPP 593 824 - -
Sebi16g00156 837 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00156 Sebi-Chr16 2421737 2424571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00156 1 834 Trehalose Biosynthesis Gene Families AT1G23870 62.989 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00156 K16055 - gmx:100808800 1341.64