Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00151 ATGACCTATTCAGAGGATGAAGTGGTGAAGCAGGCCCTAGTAAGATTCATGGACAAACTTGCACTAGGGAATCCACAAAGGCATACCAAGTATTGGGGTTGGAACCTTGCTTCAGACCCTTGCATTGGTAATTGGTATGGTGTGAGTTGCTTAAGGGGGAAAGTGAATAGTATAGTTCTTGATGATTCCAGCTTAAATGGGACTTTAGATGCCACTTCTCTTTGCATGGCAAACTCTCTTCAAAGCCTTAGCTTGAAGAAAAACAATTTACATGGATTGGTACCTGAGGATATAGGACTTTGCAAGTCCTTGACTCATTTGTATTTAAGTGACAACAACTTCTCTGGTGATCTTCCAACTTCTCTTGCAGAATTAGGCAATTTGAAGAGGCTTCATGTTGCAAACAACAACTTCTCTGGAGAGCTTCCTAATATGATTCATGTTTCAGGGTTGATATCTTTTCTTGCTGAAAACAACAAATTCACTGGGGAAATTCCTGATTTTAACTTCTCCATGCTTTTGGAGTTTAATGTCTCCAACAACAATTTAGAGGGTCCAATTCCTGATGTCAGAGGGGCATTCCATGTAGATAGCTTTTCTGTCAATCCCAATTTATGTGGAATACCACTTCCAAAGGCATGTCCCCCTACTCCTCCACCACATGCAGGGAAAGACAGAAAATCCTTCATTGATAGTTTGGGTACTTATTCAGGTTATGTAATTCTAGGTGTATTTGTCCTGTTTTTGTTTGCCTACATATTGGTAAGGAAATTCAAGACCAAAGAAGAAGCATTGGCCATTGAAAAGAAGGGAGTGGAAGAAGATACTAGTGATGAAAAGCCTAGAGAATTTTCCTCTGGAACTAGGAGTGGCAATGGGATGAGATCCGGGAATTCAATTGCATTGGCATCCTTTGAAAGTGGGATGAACACATCAACATCAACTCTTGTTGTTTTCTCAAGCCCAGTGTCAAAGGCATTGCAACTTGAGGACTTGCTCAAAGCTCCTGCTGAATTAATTGGGAGAGGAAAGCATGGAAGCATCTACAAGGTGATGCTAGAGAATGGGGTGCTTTTGGAAGTCAAGTGGATCAAGGATTGGAGAATTTCAAAACAAGATTTTGAGAGAAGGATGGACAATATTGGCCAAGTGAAGCATCCATATGTAGTGCCACTTGTTGCATATTATTGCTCACCACAAGAGAAGCTACTAGTATATGAATACATGGAGAATGGGAGTCTCTTCCAAATGCTATGTGGATCCCAGAGTGGCCAATCTTTTGACTGGTGGAGCAGACTTAATGTTGCTGCTAACATAGCTGAGGCTTTGGCTTATATGCATGAGGAGCTTTGTGAGAGTGGAATAGCTCACGGTAACTTAAAATCAAGTAACATTTTATTTGGCAAGGATATGTATCCATGCATAAGCGAATATGGTCTGATGGTGATTGATGATCAAGCTCAAAGTGAAATTTCTCATGGTAGAAGTCTCAAAAACAAGAGTCTGATTGCTGCTAATGCATATAGCACCTTCAAAGTTGATATATATGCCTTTGGTGTGATACTTCTTGAGCTTCTGACAGGAAAAGTAGTACAAAATAATGGATTCAATCTGGCCAAATGGGTGGATTCAGTGGTCAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGGCATTAATGTCACAAGGTGCTAGTGAAGAGAGGATGATGAACTTGTTGCATGTAGCACTAAAATGCACAAATCCTTCACCAACTGATAGACCAAGCATGAGTGAAGTTGCAGCAATCATAAGTACATTGAAAGAGGAAGAAGAAAGATACACAAGCTTTGACCAATAA 1839 0.4035 MTYSEDEVVKQALVRFMDKLALGNPQRHTKYWGWNLASDPCIGNWYGVSCLRGKVNSIVLDDSSLNGTLDATSLCMANSLQSLSLKKNNLHGLVPEDIGLCKSLTHLYLSDNNFSGDLPTSLAELGNLKRLHVANNNFSGELPNMIHVSGLISFLAENNKFTGEIPDFNFSMLLEFNVSNNNLEGPIPDVRGAFHVDSFSVNPNLCGIPLPKACPPTPPPHAGKDRKSFIDSLGTYSGYVILGVFVLFLFAYILVRKFKTKEEALAIEKKGVEEDTSDEKPREFSSGTRSGNGMRSGNSIALASFESGMNTSTSTLVVFSSPVSKALQLEDLLKAPAELIGRGKHGSIYKVMLENGVLLEVKWIKDWRISKQDFERRMDNIGQVKHPYVVPLVAYYCSPQEKLLVYEYMENGSLFQMLCGSQSGQSFDWWSRLNVAANIAEALAYMHEELCESGIAHGNLKSSNILFGKDMYPCISEYGLMVIDDQAQSEISHGRSLKNKSLIAANAYSTFKVDIYAFGVILLELLTGKVVQNNGFNLAKWVDSVVREEWTVEVFDKALMSQGASEERMMNLLHVALKCTNPSPTDRPSMSEVAAIISTLKEEEERYTSFDQ 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00151 612 SUPERFAMILY L domain-like 36 205 - -
Sebi16g00151 612 MobiDBLite consensus disorder prediction 271 295 - -
Sebi16g00151 612 Pfam Protein kinase domain 338 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi16g00151 612 FunFam Leucine-rich repeat receptor protein kinase EMS1 71 167 - -
Sebi16g00151 612 Gene3D Transferase(Phosphotransferase) domain 1 409 611 - -
Sebi16g00151 612 Gene3D Phosphorylase Kinase; domain 1 301 408 - -
Sebi16g00151 612 SUPERFAMILY Protein kinase-like (PK-like) 337 595 IPR011009 -
Sebi16g00151 612 PANTHER OS05G0588300 PROTEIN 10 602 - -
Sebi16g00151 612 Gene3D Ribonuclease Inhibitor 7 152 IPR032675 -
Sebi16g00151 612 Pfam Leucine rich repeat N-terminal domain 10 50 IPR013210 -
Sebi16g00151 612 ProSiteProfiles Protein kinase domain profile. 334 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi16g00151 612 Gene3D Ribonuclease Inhibitor 153 217 IPR032675 -
Sebi16g00151 612 MobiDBLite consensus disorder prediction 271 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00151 Sebi-Chr16 2384881 2387280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00151 34 601 Receptor kinase-like Gene Family AT1G68400 34.747 4.41e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi16g00151 Pkinase 1.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00151 - - qsa:O6P43_030895 745.347