Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00138 ATGAACCAACAAGATGAAGTTAAGGAGGAAGTTGAATTGGCCCTAAAGAGGCATCTAAACAACATGAAACAGACCTGTGGAAAGGAAGTGAATACTACTGAATCAAGAACTTTGCAGCTGCAGTTTGAAAACAACATTTCTCTTCCTGTCTTTACAGGAGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAAATTTAGTTGATACCCTAACAGGGAAGGTTGTTAGTACAGGACCTGAATCATCAGCTAGGGTGGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAGGTGACATTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTCCTTACAGGAGAGGTAATTTTTTATCTTAAAGATGGGAAGGGTGTAGTGGGTGAAATTTCATACACAGATAATTCAAGCTGGACACGGAGCCGTAGGTTCAGGCTCGGGGCAAGAGTTCTGGACAACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAGCACCACCCTCCTAGTCTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCATTCCACAAGCGTTTGAGTCGGGAAAAGATCCTTACTGTTAAAGATTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTACGCACTATACTGGGCACCGGGATGTCTGCAAAGATGTGGGAGGTGACTGTGGAACATGCTCGAACTTGTGTACTTGATACAACGAGGTACCTGCACTTCCCTGCTCATTCTCAACAACGTGGCGTGGTCTTCAATGCTGTGGGACAAGTGACAGGACTGCTCTCTGAACGCGAGTATGTCCTTGTAGATAACCTGTCCGAAACTGAAAAGGCATTTATCTCTGATCACCTGTTACTTTCGTTATTCTCTCCTTCCCTTTCTTATTTCTCCTTAATACTTAACAACCCGATTTTCCACCATCAGGCCGAAGCTCAAAACTCAGTTATTTCTGCACTTAATCAAGGGGATTATGCCACTTTTGAAGATGAAGCCTCCCTCATGGATGGATCTTCACACTTAACAGATGCACTTTACTCCCCAAGCTCTCCCAGGACTGAAGGATCAAGTGCTAACAAGCTTTTGGCTCCTCAAAAGAGTGGAGGATTCAACTACACACAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTGTTGGTGGAACTAGTGGCTTGGATGACTATGGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCAGACCCTTGGTTTTCCAGTCCAAGTTTCCAACTCTTTGATCTGTGACACAGATTCAATGGCCCATGCTTTTGGCGACGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCAGTGCAACATTCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCTAGCACGTTCTACATCGATTGCCAATGGTAAAGCTCAGAGGAGATGGAGAAAGTTATTCAATGTCTTAAAATGGTTCATGCTCTTGGCAGAAGATCCATCTCTGAAGCCATTCAAATCATATAAGAAGAGTGTGTCACGTCTCAAAAGAATTGGGGATGTTCTAACAATTGCTGCTGTTGCTGGATGTTGTTATGAAATATATGTCAGAGCAGCTACGAGAGAAGAAGCTCGAAAAATAACGGCAATTGCTGAAAATGCATAA 1752 0.4281 MNQQDEVKEEVELALKRHLNNMKQTCGKEVNTTESRTLQLQFENNISLPVFTGARIEGEDGSNLRINLVDTLTGKVVSTGPESSARVEIVVLEGDFEEEGDIWMPEEFKSNIVREREGKKPLLTGEVIFYLKDGKGVVGEISYTDNSSWTRSRRFRLGARVLDNFDGIRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKILTVKDFLTLLNLDPAKLRTILGTGMSAKMWEVTVEHARTCVLDTTRYLHFPAHSQQRGVVFNAVGQVTGLLSEREYVLVDNLSETEKAFISDHLLLSLFSPSLSYFSLILNNPIFHHQAEAQNSVISALNQGDYATFEDEASLMDGSSHLTDALYSPSSPRTEGSSANKLLAPQKSGGFNYTQASASSPDIMSSIYSVGGTSGLDDYGLPNFDSMGLRYDQTLGFPVQVSNSLICDTDSMAHAFGDEDHLQFFDTDLQSQCNIQADLQSAVDSFMLARSTSIANGKAQRRWRKLFNVLKWFMLLAEDPSLKPFKSYKKSVSRLKRIGDVLTIAAVAGCCYEIYVRAATREEARKITAIAENA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00138 583 Pfam Calmodulin binding protein-like N-terminal domain 38 183 IPR046831 -
Sebi16g00138 583 Pfam Calmodulin binding protein C-terminal domain 267 311 IPR046829 -
Sebi16g00138 583 Pfam Calmodulin binding protein central domain 195 261 IPR046830 -
Sebi16g00138 583 PANTHER OS02G0177800 PROTEIN 7 319 IPR012416 GO:0005516
Sebi16g00138 583 Coils Coil 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00138 Sebi-Chr16 2228502 2241027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00138 7 321 Calmodulin-binding Proteins AT5G62570 60.443 3.61e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00138 - - gmx:100793156 812.757