Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00124 ATGGCTACCACCGGCGAAGTTTTCCGGCAGAATTTGACGGAGGTGTTGGAAGAGTCGCCTTCTGGTGTAGACGAACTGCACGTTCTTGCTGTCGATGACAGCCTTGTTGATCGTAAAGTCATTGAGCGTTTGCTGAAGATTTCTTCTTGCAAAGTGACGGTGGTTGAGAGTGGAAGACGAGCTCTTCAGTATTTGGGGTTGGACGGAGAGAACAGTTCTCTTGGATTTGATAGTGTGAAGGTTAATCTGATAATGACGGATTATTCTATGCCGGGGATGACAGGATATGAACTACTCAAGAAAATCAAGGAGTCTTCTGTTTTTAGAGAGATTCCGGTGGTGATCATGTCGTCGGAGAATATCTTGACTCGAATTGATAGGTGCCTGGAGGAAGGAGCAGAGGATTTTTTGTTGAAGCCGGTCAAGTTGTCAGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGGGAGAGAACATCTAACAAAAGAAGGAGATCAGATGATTGCAGCCAATCTCTATCAACTACATTCTCACCAATGTCTCATCCATGTGATCCATGTTCATCAGTACTCTCAGTCTCACCACTATCACCATCCACTTTACCCTCAAAAAAGTCTAGATTGTGA 642 0.4408 MATTGEVFRQNLTEVLEESPSGVDELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGRRALQYLGLDGENSSLGFDSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGERTSNKRRRSDDCSQSLSTTFSPMSHPCDPCSSVLSVSPLSPSTLPSKKSRL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00124 213 FunFam Response regulator 3 26 184 - -
Sebi16g00124 213 Gene3D - 26 186 - -
Sebi16g00124 213 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Sebi16g00124 213 CDD REC_typeA_ARR 28 149 - -
Sebi16g00124 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 166 IPR045279 GO:0009736
Sebi16g00124 213 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Sebi16g00124 213 MobiDBLite consensus disorder prediction 160 174 - -
Sebi16g00124 213 MobiDBLite consensus disorder prediction 160 191 - -
Sebi16g00124 213 SMART REC_2 26 150 IPR001789 GO:0000160
Sebi16g00124 213 MobiDBLite consensus disorder prediction 175 191 - -
Sebi16g00124 213 SUPERFAMILY CheY-like 25 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00124 Sebi-Chr16 2027120 2029106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00124 5 168 Response Regulator Gene Family AT3G48100 70.060 5.11e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi16g00124 Response_reg 4.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00124 K14492 - gmx:100796843 320.472