Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00106 ATGAAGCTCATGAAGGAGTTGTGCACGAAGGAGGAGGGCTCGTCTCACTCGGCGTTTGTTCACCGAGTTCACAGCTTCGTGTGTTATAAAGTGGCGTCGGCTATTACCGACCCGGCCGCGAAGCAACGGCATTTGAAGAACGCTATTGAGTCTGCGCGGAGAGCGGTTGAGCTTTCGCCGAATTCGGTTGAGTATGCGCATTTCCATGCCACTGTGTTGTTGGAGGCAGCAACTGAGGGGAAAGACTATGAGGAGGTGGTGCACGAGTGTGAGAGGGGGCTTGCCGTTGAAAACCCCACTGATCCTTTGAAGGAGACCTTGCAGGATGAGAGTGAGCAGAAAGTGTCCACTGTGGAAGGACGGATAGCACATGTGCAGAATGAGTTGCGGCAGCTGATTCAAAAGTCAAATATTGCTTCCTTGTCTTCTTGGATGAAGAATTTGAGTAATGGGGAGGAGAGGTTTCGGTTGATTCCTCTAAGGAGGCCTGCGGAGGACCCGATGGAGGTGAGGTTAGTTCAGACTAGAAGGCCAAATGAGATCAAGAAGGTGACTAAGACACCCGAGGAAAGAAGAAAAGAGATTGAAGTTCGAGTTGCCGCAGCAAGGCTGTTGCAGCAGAAGTCAGAGTCACCCCATTCTCCGAATGAAGGAGATAGGGATGACAGAGCATTGGATTCATCTTCAGGGTCTGGTCAGAGGATAGGCGATAGGCGAAGGCATAGAAAGAATGGCTCTACAGATGAAAGGAGAAATTGGGTGCTGTCATATTGGAATTCTGTGAGTATGGATATGAAGAAGGAGTGGCTTAGGATTAATATTTACGATCTCAAGTCCCACTACGGGTCTTCAAAGGATACTTTGCCAAAAGATATTTTATCAGAAGCTTTGTCTTATGCTGATGCCAATAAAACATGGAAATTTTGGGGTTGCTGCCGTTGTGATCAGAAATTTTCCAATCCAGAATGTCACAGACGGCATATTGTGCAGGATCACATGGAGAGTCTCTCTTTGAAAATGCAAAGACTTTTGCCCCAAAATATTGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTTTGGATGTATCAGCTGCAGTTAAAATGCTTGACAATAAAGCAAAATTCAGAAGCTCTTCATTTCCTGAGGATTCATACTTGGGTCATCATACTAAGGACTACGATGATTGTTTTAAAGATGCAAGCAACTCTTCCTATGAGAAGGAAAGTTTAGGCTACAGTCTTCATAATTGTACGACAGCAAGTGTATCTGATGACTCCGAGCGTGCAAAACTTCTGGAGAAAATTCATGCAGTATTTGAGATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAACAAGGTCATACAATTTAGTATGGGTGAGATACAAGGTCTTGCTGCTGGTTCTCAACTTCTAAAACATGGTGTAGATCAAACACCAATGTGCATATGCTTTCTGGGAGCTTCACAGCTTAAGAAAATTCTCCAATTTCTGCAGGAAATATCTCATGCTTGTGGGTTGGGCAGATATCCTGATAAAAGTAGTAGTCCCATGAATGATTTGCATAATATTAGTCAAGGTCCTGAGATCAAAGATAAGGTTGTTCTTGTTGCAGATGCATCATGCCTCCTTCTGGATGAGTGTTTACTGCCAACACAAGTTACTCCTGGTACAGCCCAGGGGGCTGTCTTGGATGATGTGGCAGCCCCGAGTTCTCCTGATGGAAGTTCACACAACAACGATGCTTTTCTATCCTGGATATTTTCAGGTATGCCTATTGGGGATCAATTGACATTATGGATACGGACCAAAGAAGATAAAATACGTCGAGGAGTGGAAACAGTCCAGACACTTGAGAAGGAGTTTTATCACCTACAAAGCTTATGTGAGAAGAAGTGTGAGCGTATAAGTTATGAGGAAGCACTGCAGACAGTGGAGGATCTTTGTCTTGAAGAAGGTAAGAAGCGGGAAAATGTTGGTGAATTTGTTCAGCGAAGCTATGAGTCTGTCTTAAGAAAGCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTGATGTACGTTAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTCGTGCAAGAAGCAGAAGCGATGAATGTTAATCAATTTGGCTATGAGGAAACTTATGCTGGTGCGAGTTCTCATTCTCAGTTATGTGATTTGGAATCTGGTGAAGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGCTGCATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTATCTATAGAGCTTAGCAAAATTGATGCCCGAATAATTAGAAATATTACAGAGATGCAGCAGTTGGAACTCAAGCTTGGGCCTATTTGTGCTAATGATTATCAAGCAATATTAGTGCCTTTAGTGAAGTCATACCTAAGGGCACTTTTGGAAGATTTAGCTGAGAAAGATGCAAGAGAGAAATCTGATGCTGCAAGTGAAGCATTTTTAGCTGAACTTGCTCTTGATTCCAAGAAGGTTGTTAAAGGGGGAAGTGAGAACATGAGACATGTAGAGAAGACAAAAGATAAGAAAAAGAATAAAGATCACAGAAAAACAAAAGATTTGAAGGCCACAAGTAGTCATGTGCAGCCCTTGCATCAATCTACAACTCTCGATTCCGATCTAGTTGCACCTGATAGTGACTTTCAAGATCACGAGGTTGTTTCTATCAATGGTGATGATTTGGAACAACATGAAGAGGAATTTAGACGTAAAATGGAGCTAGAAGAGGAGGAAAAAAAACTTGAAGAAACTTTGGAATATCAACGAAGGATTGAAAATGAGGCCAAACAGAAGCACCTCGCAGAGCAACAAAAGAAATCATCTGGGTCATATTTAGAGGGAGTGATGGAGAAACTTCAAGATTGTCAATTGAATGTGGTTGCTGATGGCTTAGATACACATGAACATGTAAGACTACCTATGCAGGAGCAGTTGCCAAAGGAGAATGGGTGCCCAAGCAATCTGAATGGTGTACTTATTACCACAGCAAATGGATCCATGGAGCCAACTAAATCTTCAGCTGATTCAGCTGCTCAAAAGAGTAATCATTTACATCAGTCAAAAGTTAAACAAGCAGATATGCCTAATGGAATTGTTCCAGAGAATGGTCTACCTTTGTCTGATCGGCGTGCAGTAAAAAAGCATAGACGGCACAAGAATTCTTCCAGAATGGTTGATGGAAAGCATGAATCTGTCTCATTGGAAAAGGAGAATATCGAGGATTCACATACTGACCATCACTTAAAAGAGCAGGCTAAGTTCCATAACAATCAAGATGCTAACAATGTGTGGGAAAACAATGGACCAAAGGTGATGAAAGAATTGCAAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTGGACACATATCAAGCACGTGGAAATTTGCCTTCAGCTTCCAGTCTAAGAATGTCGCAGAGAACTTCTTCACAAATAGATTATTCAGGTTTTCCACCTGTGGAAGACTCGACTGAGGATGTTAATAGAGCTACTTTGCTTGGTACTGGACTGAGAAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGGCAGATCAAGATCAGAACATGATCACGTGGGTGATCCCTGTGTTGTCTGTGCGTTGTATGAAATATTTACTGCACTGGAACTTGCATCAAAGGATTCAAGAAGAGAAGCAGTTGCACCTACTTCCCTGCGGATAGCCCTAAGCAATCTATATCCACATAGTAACTTCTTCCAAGAGGCTCAAATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCAATCATTTACTCGTGGTTCAAGTGCTTTTGATGCAGAATCAGTGGAAAGCAACTGCAAGGGGTCTTGGGATTGTGCAAATGGTAGTTGTATAGCACATACACTTTTTGGAATGAATGTTTTTGAACAAATGAACTGCTACCATTGTGGTCTTGAGTCCAGGCATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATGCCCTCCGGACAATGAAGGTTATGTTTGCTGAAAGCTCCTTTGATAAGCTTTTGAATCTTGTGGAGTTGAACCATCAACTGGCTTGTGATCTAGAAGTTGGTGGCTGTGGCAAACTCAACCACATCCATCACTTTCTTTCAACTCCACCTCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGTGAGAGTGCTGATGATATAACGGCAACTCTGGCAGCCCTGAGCACCAAGATAGATATCAGTGTCCTTTATCGCGGTTTAGATCCTAAAAGCACCCATAACTTGGTTTCAGTGGTTTGCTACTATGGTCAGCATTATCATTGCTTTGCTTATAGCCATGACCATGAACAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGTTGGGCGGATGTTCTGACAATGTGTGAAAGAGGGCATCTACAACCTCAGTTCATGGTTTTCATAGGAACTAAAGGTTCTCTTGGGGGAGAATGA 4620 0.4208 MKLMKELCTKEEGSSHSAFVHRVHSFVCYKVASAITDPAAKQRHLKNAIESARRAVELSPNSVEYAHFHATVLLEAATEGKDYEEVVHECERGLAVENPTDPLKETLQDESEQKVSTVEGRIAHVQNELRQLIQKSNIASLSSWMKNLSNGEERFRLIPLRRPAEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPHSPNEGDRDDRALDSSSGSGQRIGDRRRHRKNGSTDERRNWVLSYWNSVSMDMKKEWLRINIYDLKSHYGSSKDTLPKDILSEALSYADANKTWKFWGCCRCDQKFSNPECHRRHIVQDHMESLSLKMQRLLPQNIDNEWIEMILNCSWKPLDVSAAVKMLDNKAKFRSSSFPEDSYLGHHTKDYDDCFKDASNSSYEKESLGYSLHNCTTASVSDDSERAKLLEKIHAVFEMLIRHKCLAASHLNKVIQFSMGEIQGLAAGSQLLKHGVDQTPMCICFLGASQLKKILQFLQEISHACGLGRYPDKSSSPMNDLHNISQGPEIKDKVVLVADASCLLLDECLLPTQVTPGTAQGAVLDDVAAPSSPDGSSHNNDAFLSWIFSGMPIGDQLTLWIRTKEDKIRRGVETVQTLEKEFYHLQSLCEKKCERISYEEALQTVEDLCLEEGKKRENVGEFVQRSYESVLRKRREELIESENDVMYVSNRFELDAISNVVQEAEAMNVNQFGYEETYAGASSHSQLCDLESGEEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNITEMQQLELKLGPICANDYQAILVPLVKSYLRALLEDLAEKDAREKSDAASEAFLAELALDSKKVVKGGSENMRHVEKTKDKKKNKDHRKTKDLKATSSHVQPLHQSTTLDSDLVAPDSDFQDHEVVSINGDDLEQHEEEFRRKMELEEEEKKLEETLEYQRRIENEAKQKHLAEQQKKSSGSYLEGVMEKLQDCQLNVVADGLDTHEHVRLPMQEQLPKENGCPSNLNGVLITTANGSMEPTKSSADSAAQKSNHLHQSKVKQADMPNGIVPENGLPLSDRRAVKKHRRHKNSSRMVDGKHESVSLEKENIEDSHTDHHLKEQAKFHNNQDANNVWENNGPKVMKELQVEDEEEERFQADLKMAVRQSLDTYQARGNLPSASSLRMSQRTSSQIDYSGFPPVEDSTEDVNRATLLGTGLRNEVGEYNCFLNVIIQSLWHLRRFRVEFLGRSRSEHDHVGDPCVVCALYEIFTALELASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHQSFTRGSSAFDAESVESNCKGSWDCANGSCIAHTLFGMNVFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKVMFAESSFDKLLNLVELNHQLACDLEVGGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTKIDISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDHEQWIMYDDKTVKIIGGWADVLTMCERGHLQPQFMVFIGTKGSLGGE 1539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00106 1539 CDD Peptidase_C19 1291 1507 - -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 1022 1043 - -
Sebi16g00106 1539 SUPERFAMILY Cysteine proteinases 1200 1514 IPR038765 -
Sebi16g00106 1539 Gene3D Cysteine proteinases 1186 1523 - -
Sebi16g00106 1539 PANTHER UBIQUITIN SPECIFIC PROTEINASE 2 1529 - -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 204 246 - -
Sebi16g00106 1539 Pfam Protein of unknown function (DUF629) 255 758 IPR006865 -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 849 895 - -
Sebi16g00106 1539 Pfam Protein of unknown function (DUF627) 1 98 IPR006866 -
Sebi16g00106 1539 Coils Coil 913 949 - -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 213 227 - -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 1162 1182 - -
Sebi16g00106 1539 Coils Coil 115 135 - -
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 1162 1186 - -
Sebi16g00106 1539 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1200 1533 IPR028889 -
Sebi16g00106 1539 Pfam Ubiquitin carboxyl-terminal hydrolase 1201 1507 IPR001394 GO:0004843|GO:0016579
Sebi16g00106 1539 MobiDBLite consensus disorder prediction 879 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00106 Sebi-Chr16 1628428 1637873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00106 1 1529 C2H2 Transcription Factor Family AT3G47890 56.814 0.0 1672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00106 - - gmx:100799759 2414.42