Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00077 ATGACCATCAATCTGAATGTATTGTCTTCACTTTCAGTGCAAGGTAAATGGATAGGATCTTCAAACTGGAATACAGTGGTGGATCCTTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGAAATTCAGCCCTTTGTGGAAAGCTTGTCCAGCTGTCCCAAACATGGTTTACACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTTGGGAGATGTATCTACTAAGGCAGCTCACATGCTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATACAAAGGGTTTCGCCAAAGAGTTACCAGCAAGCTGAAGGAGAAGTTTATGTGACACGGAAGTTTCTAGAGAATTTTTGCGGAGATCAGTCCTTACTTCATTTCAACAAATCCTCGGCAGGTTCGATTCCTGGCAAGGTCTTTTGCAGTACCTGGAAATCATCTTGGACAGCAAAGTCATGGTTTTCGTTGGCCATATGGTCCGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGCAACAAGCCCGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAGCAAATGTTGCGGCTTCTTCATACATGTGGTTTACCTGCAGAAGATGTAGACTTTATAAATTCTGATGGGAAGACAATGAACAAGCTGTTGTTGGAGGTTGGTTGTTTGGGAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGGTGATTTGAGGGGCCGCATTAAGTTGGAAGATGCTGGATTTGACTGGAAAATACTTGGCCCTGATGTTAATCAGGAAAATTACATTGCTTGGGTCTGTGACCAGGATGCATACGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTGTTATTTATGCATGAGAACTGGTCGAATACTTCCTTCATATCTAAGTTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCGGACTTGACAATTGGTCCAGTCCTCACTTTTACAACTGATTCGTTGCTAGAACACACGAATAAGTTACTTGAAATACCTGGGTCAAAGCTGCTCTTTGGAGGTCAGCCTCTGGAAGATCATTCAATTCCACCAATTTATGGTGCTATTAAACCAACTGCTGTTTACGTTCCTCTTGAGGAAATTATGAAGGAAAAGAATTATGAGCTTGTGACAAAAGAAATATTCGGACCTTTTCAGGTTATTACTGACTACAAAAGCAGTCAACTATCAACTGTGTTGGATGCTGTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTTTATTCTTACAGGAAGTCATTGGAAAATCAGTAAATGGAACTACTTATGCTGGTTTAAGAGCAAGGACAACTGGAGCTCCACAGAATCACTGGTTTGGACCTGCTGGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCTATAAAACTCAGGTATGTTGGTATACCATAG 1488 0.414 MTINLNVLSSLSVQGKWIGSSNWNTVVDPLNGDSFIKVAEVDETEIQPFVESLSSCPKHGLHNPFKAPERYLMLGDVSTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAEGEVYVTRKFLENFCGDQSLLHFNKSSAGSIPGKVFCSTWKSSWTAKSWFSLAIWSEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPAEDVDFINSDGKTMNKLLLEVGCLGNPRMTLFTGSSRVAEKLAGDLRGRIKLEDAGFDWKILGPDVNQENYIAWVCDQDAYACSGQKCSAQSLLFMHENWSNTSFISKLKDLAERRKLADLTIGPVLTFTTDSLLEHTNKLLEIPGSKLLFGGQPLEDHSIPPIYGAIKPTAVYVPLEEIMKEKNYELVTKEIFGPFQVITDYKSSQLSTVLDAVEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLRYVGIP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00077 495 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 288 299 IPR016160 GO:0016491
Sebi16g00077 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 260 IPR016162 GO:0016491
Sebi16g00077 495 FunFam probable aldehyde dehydrogenase 5 263 - -
Sebi16g00077 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 263 455 IPR016163 GO:0016620
Sebi16g00077 495 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 12 489 IPR044638 GO:0004029
Sebi16g00077 495 SUPERFAMILY ALDH-like 11 480 IPR016161 GO:0016491
Sebi16g00077 495 Pfam Aldehyde dehydrogenase family 25 455 IPR015590 GO:0016491
Sebi16g00077 495 FunFam Aldehyde dehydrogenase 12 271 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00077 Sebi-Chr16 1245672 1252726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00077 13 489 Aldehyde Dehydrogenase Gene Family AT5G62530 76.033 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00077 K00294 - gmx:100806579 799.66