Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00074 ATGCTGGGTGTAAGAGTCATTTCGCAATGCTTCGGAATAAAGATAAAAGAAACTGGAACACTTGGTTTTGAAGTAACTACACTGGGACTCCCCAAAAACAACCCTCCTTTATTCGCACCCACTCCCGTTTTTCTTACGTGTCCTCAAGTGTACAAAAATCTCTCTTACACACCCTTCGATCAAACCGTTTGCCAAAGTCAGCGATTCAAACCCCATCAAGTCATCGAATCTAACGGTAGAACAAAGGTTGCAGCGAATGGTAGATTTGAGGTAAAGAGGTTCCACATTGATAGGATAATTCTCAGATCTAGCCTCACACCAACTGGTCCTGGTCTCACAATGGGCAAGTCACCGGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAAGAAGGAGTAGTTTCTCCCAAGGTGTCAGAAACTGGTTTGGCTTTAGAGCCAACCCCCAATACTATCACCAGACATGAGGAAGACCTAGTGCTGGAGAATAAAGAAGCAGAAAATATTTTACCTGGAAATCAAGAAATTGATTCAATGGGATCTGTTCATCAAGATGCACCGGTTGATCCAGAGAAAATGAGGCTGGAGGAAGCAGCTACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGGAGAGCATTTAAGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAGCTGTTAGTACATTATGTTGTATGTATGAAATTGTCAAGTTACAAGCACTTGTTCGTGGAGGAAGAGTTAGACAGTCTGATGTTGGTTTTGAAATTCGTGAAAAGTGCAATCTATTGAAGCCTCTGGATGGCAAACTTGTCAATCCAATTGCTATATCCACAGAAATTATGAAGCTATCAGCAAATGCTTTCATCCGTAAGCTTCTTGGTTCATCAACTACAATAATGGCCTTGCGTTTGCAATATGTTCGTGGCGATCCAAATTCTGTTCTAAGTTGGTTGGAGCGCTGGTCAACATCTCACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGGGATGCTAAGTCTCAGAGGAAGCAGGGTAATATTTCTGTTGGAGATGCTCAAATGAGCAAGTCAAAACGTACTCACAGAAAGCTTCCTACTGCAAATTTTGACTCAGTCCCAGCTCAAGCAAATCCTGAATTTGAGAAACCAAAACGAAACATAAGGAAAATTCCAAGCCAACCCACAGATCCTGTGCAGGAAAATCCACAAGCTCAGCCTCCTACTGCTAATTCTGACTCAATCCCAGTGCAGGCAAATCCTGAATTTGAGAAACCAAAACGAAACATAAGGAAAATTCCTAGCCAACCCTCGGAACCTGTCCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTTAAACGTAGCTTGAGGAAGGTTCATAACCCAGTTGTTGAGAATGCTGTTCTGTCAGAAATTGAATCTGAGACTCCAAAGCTGCATTTGGAAAAGGAAACAGTTACCTTAAGTCTTGGTGTTTCAGAACAAGGGGTCATTAGTTCTAATGAGAAGGTCAAGAAGGACGCAACATTAACCATTTCCAGTGCGTCAGATGTAGGAATTACTCCTAGACATTCAGTTAGTAAGGAGGTGTATGAAACTCCAGGCAGCAATCAAGTGACTGTGGAATTGCAGCCCTTGACAGAGATTACAAGCAAAGATAAAAATATTTCTGATGATGAAGTAAAACATGAGCCCGAAGATTTACCAGAAACTATTTATAAAGATGAAAATTCTCACTTAACAAATGGAGACATGAGTCACAAGGAAGATCCAACAGGCAGTGAAAACCAGAAACCAACCCGGAAGGCCTCAATTGTAGCAAAGCAGGAACGTGCAGAGAATGGTTTACAGAATAGTCCAACATTACCAAGTTATATGGCAGCAACTGAATCTGCGAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGATTTGGACAAGATGGAAGTGAGAGAAATAGTCATGGTCGGCGACATTCTCTGCCATCTTCAACTAACAGCAAAATCAGTTCACATTCACCTAGGACACAGAGACCAGTGCAAGCAGGTGGCAAAGGGGGCCAGAGAAGTGACAAAACTGTATCGACTTCTAGAGATGCGAATGGAAAGGTAATTCAAGCAGAGTGGAGAAGGTGA 2220 0.4221 MLGVRVISQCFGIKIKETGTLGFEVTTLGLPKNNPPLFAPTPVFLTCPQVYKNLSYTPFDQTVCQSQRFKPHQVIESNGRTKVAANGRFEVKRFHIDRIILRSSLTPTGPGLTMGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVSPKVSETGLALEPTPNTITRHEEDLVLENKEAENILPGNQEIDSMGSVHQDAPVDPEKMRLEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVSTLCCMYEIVKLQALVRGGRVRQSDVGFEIREKCNLLKPLDGKLVNPIAISTEIMKLSANAFIRKLLGSSTTIMALRLQYVRGDPNSVLSWLERWSTSHFWKPVPQPKKIRDAKSQRKQGNISVGDAQMSKSKRTHRKLPTANFDSVPAQANPEFEKPKRNIRKIPSQPTDPVQENPQAQPPTANSDSIPVQANPEFEKPKRNIRKIPSQPSEPVQENPQSELEKVKRSLRKVHNPVVENAVLSEIESETPKLHLEKETVTLSLGVSEQGVISSNEKVKKDATLTISSASDVGITPRHSVSKEVYETPGSNQVTVELQPLTEITSKDKNISDDEVKHEPEDLPETIYKDENSHLTNGDMSHKEDPTGSENQKPTRKASIVAKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRFGQDGSERNSHGRRHSLPSSTNSKISSHSPRTQRPVQAGGKGGQRSDKTVSTSRDANGKVIQAEWRR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00074 739 ProSiteProfiles IQ motif profile. 236 263 IPR000048 GO:0005515
Sebi16g00074 739 PANTHER IQ-DOMAIN 5-RELATED 114 698 - -
Sebi16g00074 739 Pfam Protein of unknown function (DUF4005) 638 718 IPR025064 -
Sebi16g00074 739 Pfam IQ calmodulin-binding motif 236 253 IPR000048 GO:0005515
Sebi16g00074 739 Pfam IQ calmodulin-binding motif 214 233 IPR000048 GO:0005515
Sebi16g00074 739 MobiDBLite consensus disorder prediction 581 603 - -
Sebi16g00074 739 SMART iq_5 234 255 IPR000048 GO:0005515
Sebi16g00074 739 SMART iq_5 211 233 IPR000048 GO:0005515
Sebi16g00074 739 MobiDBLite consensus disorder prediction 559 580 - -
Sebi16g00074 739 ProSiteProfiles IQ motif profile. 212 240 IPR000048 GO:0005515
Sebi16g00074 739 MobiDBLite consensus disorder prediction 422 447 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 687 706 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 640 655 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 541 739 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 358 483 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 609 625 - -
Sebi16g00074 739 MobiDBLite consensus disorder prediction 716 730 - -
Sebi16g00074 739 Gene3D - 209 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00074 Sebi-Chr16 1188104 1196334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00074 114 739 IQD Protein Family AT1G74690 41.718 5.93e-120 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00074 - - lja:Lj0g3v0315489.1 966.837