Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00069 ATGGTAAATCCTGCTCCTGCAAGCTTTTGGATTCAGGCAAACGCTCTTCTCAGGAAGAATCTAACCTTCCAGAAACGAAACGTGAAGACAAACATTCGGCTGATTCTGTTTCCTTTGATCCTGTGCGTTTTGCTGGTTGTCCTCCAACGTTTAATCGACAATCAATTGGATAAGCCCAAGTTCAAATGCGGTTGCGTTTGTGCCAACAACAAAGCAAGAGACGCTCATTGCCATGGCTCCGAGAAGGTTTGTGGGGTCCAGTATTCGGATTCGGATCAATTTGTATTCTGTGCAATTCCCAACCCACCCGAATGGCCCCCCTCTCTTGCAACTTCCGGCTCCAACCGTTTTCTTGCAGGAGAACCTATTCTTGTGTCTGAAAATATGTTCCCAAGTGTCTTCACTATAAGTGACTCTGATATCATGGCTAGTTTGGCAGAGAATGTCCTGTGCCCAAAGAACTCTGAATTCTCCTTTCCCTTCCAAATAGCAGCCACTGATGTGCAGCAAGAGGTAAGGTGTGCTCAGGGTTTACATTTATGGCGAAATAGTTCTTCTGAGATCAACAATGAGCTTTATAAAGGTTATCAAAAAGGTAACCCTGAAGGACAGATTAATGAGATAGTTGCAGCTTATGATTTTCTAAATTCAAATGAGAATAGATTTAATGTCAGCATATGGTACAACTCAACCTACAGGGATGACAATGGATTTGGTCCTGTTGCATTGGTGCGGATCCCTCTTTCTGTAAATCTGATATCGAATGCCTACCTGCAGTCTCTGCTTGGACCTGATACCAGAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCAAATTAAGCTTGAGATAGCTTCTCTTCTAGGTGGTCTGTTCTTTACGTGGGTCATCCTGCAACTTTTTCCTGTTGTTCTGACATCACTGGTATATGAGAAACAACAAAATTTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCATATAGCTATTTTCTTGCCATATCAGTGATCTACATGTTTTGTTTTGTGATATTTGGCTCAGTCTTAGGTAAGAATACAGCCATTGAACTGTTTCCTCTTGGTGTTTTCGCATTCTCTTTAATGCCGCTGGCTTTATTTTCAGGATTAAAATTCTTCACGTTGAATGACTACAGCATTCAATTTGTGTTTTATTTCATCTATATAAACTTGCAAATTTCACTGGCATTTCTGGGGGCTTCCTTATTTTCAAATGCTAAGACTGCTACAGTAACTGCCTATATAGGTGTCTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAAACACATCATTTCCAAATAGCTCCTTGCTTCTCCTTGGTACACATCCCAAACAAATTAGACTAGCAACTAGAACATCAATCAAGTGCTACCATACACCATTAATGGGAACTCCTCGAGTCTCACGTCTCTGGTTGCAGCCAAATGTGGCACCACCTGCCACCCAAATACTGTCAGCAGAGCACTCAGCAATGGCGAATAGCTTTGCTCTTCCTCCTCAAATAGAAACAGATGGTGGACAATACCCAGAGGGTGGATCATTTTTATGGAGCTTTATCCTGGGTTTGCTTTATATCGCGGGTTTATATGAGTTTGCACAATATTCCTCGAATGGGAGTACTCTGGGGACTGATGGTATGCGGTGGCAGGATCTGAGTGATAGCACCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGAAAGTGATGTTTTTTGCTGCTTATTACATCGATAAAGTATTGTCATCAGGAAGTGGAAAAAGTCCTCTTTTTTTCTTGAAAGGATTTTTGAGAAAGCCTCCTTCATCAATCCAGAAGCCCAGTATGCGAAGGCAGGTGTCTAAAGTTTTGGTTCAGATGGAGAAACCTGATGTCATCCAAGAGAGGGAGAAGGTGGAGCAACTGGTACTTGAACCAACTATTAATCATGCAATTGTATGTGACGACCTAAAAAAAGTCTATCCAGGGAGGGATGGAAATCCAGAGAAATTTGCAGTGAGAGGGTTGTTCCTTGCTGTGCCTCGAGGGGAATGCTTTGGTATGCTCGGTCCCAATGGTGCTGGGAAGACTTCTTTCATCAGTATGATGATTGGTCTCACAAAGCCAACCTCTGGTACGGCATTTGTTCAAGGCCTGGACATAAGAACTCATATGGATGAAATATATACTAGCATGGGAGTGTGCCCACAGTATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTATGGCAGGCTTAAAAATCTTAAAGGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTTCATGGGGGGGTTGCTGATAAACAAGCTGGGAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTGCATTGATTGGGGATCCCAGAGTTGTTTATATGGATGAGCCAAGTACCGGGTTAGACCCTGCTTCAAGAAAAAGCTTATGGAATGTTATTAAGCTTGCAAAACGGGATCGTGCAATCATTCTGACTACACATTCCATGGAAGAGGCAGAGGCCTTATGTGATCGATTAGGAATATTTGTAAATGGTAGCTTGCAGTGCGTAGGAAATCCAAAGGAGCTGAAAGCCAGATATGGAGGAACTTATGTGTTAACAATGACAACATCTTCGGATCATGAGAAGGATGTGGAAAACATGGTGCATAAGCTCACCCCAAATGCCAACAGGATATACCATATCTCTGGTACCCAGAAGTTTGAGCTGCCAAAAGAAGAGGTTAAAATAGCGGATGTATTCCGAGCTGTTGATGCTACAAAGAGAAAATTCACTGTTTTTGCATGGGGTTTATGTGACACCACATTGGAAGATGTCTTCATTAAAGTGGCACGTGAGGCTGAGGCATTAGATGCCTAG 2952 0.4214 MVNPAPASFWIQANALLRKNLTFQKRNVKTNIRLILFPLILCVLLVVLQRLIDNQLDKPKFKCGCVCANNKARDAHCHGSEKVCGVQYSDSDQFVFCAIPNPPEWPPSLATSGSNRFLAGEPILVSENMFPSVFTISDSDIMASLAENVLCPKNSEFSFPFQIAATDVQQEVRCAQGLHLWRNSSSEINNELYKGYQKGNPEGQINEIVAAYDFLNSNENRFNVSIWYNSTYRDDNGFGPVALVRIPLSVNLISNAYLQSLLGPDTRMLFEFVKEMPKPETQIKLEIASLLGGLFFTWVILQLFPVVLTSLVYEKQQNLRIMMKMHGLGDGPYWMISYSYFLAISVIYMFCFVIFGSVLGKNTAIELFPLGVFAFSLMPLALFSGLKFFTLNDYSIQFVFYFIYINLQISLAFLGASLFSNAKTATVTAYIGVFGTGLLAGFLFQFFVQNTSFPNSSLLLLGTHPKQIRLATRTSIKCYHTPLMGTPRVSRLWLQPNVAPPATQILSAEHSAMANSFALPPQIETDGGQYPEGGSFLWSFILGLLYIAGLYEFAQYSSNGSTLGTDGMRWQDLSDSTNGMKEVLIIMFAEWKVMFFAAYYIDKVLSSGSGKSPLFFLKGFLRKPPSSIQKPSMRRQVSKVLVQMEKPDVIQEREKVEQLVLEPTINHAIVCDDLKKVYPGRDGNPEKFAVRGLFLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGTAFVQGLDIRTHMDEIYTSMGVCPQYDLLWESLTGREHLLFMAGLKILKAVEESLKSLNLFHGGVADKQAGKYSGGMKRRLSVAIALIGDPRVVYMDEPSTGLDPASRKSLWNVIKLAKRDRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNPKELKARYGGTYVLTMTTSSDHEKDVENMVHKLTPNANRIYHISGTQKFELPKEEVKIADVFRAVDATKRKFTVFAWGLCDTTLEDVFIKVAREAEALDA 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00069 983 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 669 900 IPR003439 GO:0005524
Sebi16g00069 983 ProSitePatterns ABC transporters family signature. 802 816 IPR017871 GO:0005524|GO:0016887
Sebi16g00069 983 Pfam ABC transporter 695 829 IPR003439 GO:0005524
Sebi16g00069 983 CDD ABC_subfamily_A 673 888 - -
Sebi16g00069 983 SMART AAA_5 699 877 IPR003593 GO:0016887
Sebi16g00069 983 FunFam ABC transporter A family member 7 658 928 - -
Sebi16g00069 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 658 901 IPR027417 -
Sebi16g00069 983 Gene3D - 660 928 IPR027417 -
Sebi16g00069 983 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 636 979 IPR026082 GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00069 Sebi-Chr16 1153878 1163517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00069 673 911 Calmodulin-binding Proteins AT2G36910 24.314 6.15e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00069 - - vra:106769009 1135.94