Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi16g00044 ATGGCCACCGTCACCACACAAGCTTCTGCCAACCTTTTCAGGCCATGTGCCTCCAAATCAAGGTTCCTTACAGGCTCTTCTACTAAACTAAACAGGGAAGTGGCTGTTAGTTTTAGATCAATGGGGTCTCCTTCATTAACCTCTTTCAAGGTTCAAGCCAAGAAAGGGGAGTGGTTACCAGGCTTGGCCTCCCCATCTTACCTCAATGGCAGTCTTCCTGGTGACAATGGATTTGATCCTCTGGGGCTTGCTGAGGACCCAGAGAACTTGAAGTGGTTTGTTCAAGCTGAGCTTGTCAATGGACGTTGGGCTATGTTGGGTGTTGCAGGAATGTTACTTCCTGAAGTCTTCACCAAAATTGGTATTATCAATGTCCCCAAATGGTATGATGCTGGGAAAGAAGAGTACTTTGCATCATCCTCAACCCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTGGAAATCAGAAGATGGCAGGACATTAAGAACCCTGGAAGTGTTAACCAAGATCCCATCTTTAAGCAGTACAGTTTACCCCCAAATGAGGTTGGATACCCTGGTGGCATTTTTAACCCCTTAAATTTTGCACCTACCATGGAGGCTAAAGAGAAGGAAATTGCCAATGGGAGACTGGCAATGTTGGCATTCTTGGGATTTCTGGTTCAGCACAATGTGACAGGCAAAGGACCATTTGACAACCTCTTGCAGCATCTCTCAGACCCATGGCACAACACCATTGTCCAAACATGGAGCGGCAACTAA 765 0.4588 MATVTTQASANLFRPCASKSRFLTGSSTKLNREVAVSFRSMGSPSLTSFKVQAKKGEWLPGLASPSYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTMEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLSDPWHNTIVQTWSGN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi16g00044 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 17 250 IPR001344 GO:0009765|GO:0016020
Sebi16g00044 254 Pfam Chlorophyll A-B binding protein 65 224 IPR022796 -
Sebi16g00044 254 FunFam Chlorophyll a-b binding protein, chloroplastic 65 244 - -
Sebi16g00044 254 Gene3D Chlorophyll a/b binding protein domain 65 244 - -
Sebi16g00044 254 SUPERFAMILY Chlorophyll a-b binding protein 55 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi16g00044 Sebi-Chr16 522995 523954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi16g00044 45 247 Chloroplast and Mitochondria Gene Families AT3G61470 54.545 1.65e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi16g00044 K08910 - rcu:8263414 477.633