Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00135 ATGAACCAGTACCATATCTACGAAGCCATTGGTCGCGGCAGATACTCTACTGTGTACAAAGGCAGGAAGAAGAAGACCATTGAGTACTTTGCCATCAAAAGCGTCGATAAATCGCAGAAAACCAAGGTTCTTCAAGAGGTCAGGATTCTTCATTCTTTAGATCATAAGAATGTGCTGAAGTTTTATTCTTGGTATGAAACTTCTGCTCACCTATGGTTGGTTTTGGAGTATTGTGTTGGAGGTGATCTCCTTTCCATATTGCGGCAGGATAGCCAACTTCCTGAAGATTCGGTTCATGACCTTGCTTATGACTTAGTCAAAGCTTTACAGTTTTTACATTCAATTGGAATAATTTACTGTGATCTCAAACCATCAAATATTCTACTAGATGAAAATGGATGTGCAAAGCTATGTGATTTCGGATTGGCTAGGAAGTTGAAAGATATATCAAAAACTCCTTCTTCCTTGTTGCCTCAGGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAGGATGGTGGAGTCCATTCTTATGCTTCTGATTTCTGGGCCCTAGGTTGTGTACTATATGAATGTTATGCCGGGAGGCCTCCTTTTGTGGGAAGAGAATTCACTCAGCTTGTAAAATCCATCATTTCAGATCCAACTCCACCTCTCCCTGGCAATCCAAGTCGACCTTTTGTCAATTTAATTAATTCTCTGTTGGTAAAAGATCCAGCTGAAAGAATACAGTGGCCTGAGCTTTGTGGACATGCCTTCTGGAAAACCAAATTTACTCTGTTGCCTCTGCCTCCTCAACCTGCGTTTGATGATATGTTAGAGCTACATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAATCTTCTCATAACAGGACCCCTCCCAAATATCGTGAAAGAGATGTGAAAGGGGTGCTAAAGAAGGATGAGAATTCTGTTTTAGGATCTCGAGGCATTGAGACACCAACAAGGGCAACACCAAATGGTCACAGAACTCAGACAAAGGGTTCTGGCAGAACAATAGAGGGGAAGCAGAAAGATTCTTCCAATATTAGCAAGGGTGTGAATCTTTTGAGACTGTCAAAAATAGCAAAATCAAATTTACAGAAAGAAAATGAGAAAGAAAACTATCGACGCCCCTTACCTAATAACTCTGAGAATGATTCTGAAGTTAAAATTGAAAACACTGACATGGAACTTGATTTTAATGAGAATAGTGAAGATGATGCTCATGAAGAAACCGATTGCTCTGAACATACAGCTTCTGTGCCTGATGAGAAAATGGACAATCATTTCCAGAATCAGGGAAAAGCAGAGGAGATTGAAAATAATATGCATCCGTTGGACACCCCATCTGTTGTTAGCACTCCTGTCTCAGATGATGCAAGGTCATTCGACCAGGAGTCAACTCCTGACCGTCCTGACATATCTGCCATTTCACCCAGTGTTAGCCCTCAAGTGAGGAAACATAAACCTAGAGAAGACTCTGCATCTGGTCTTGACTCCGATTCTTCAAGGTCGTCTAACAACCTTTCCCAGGTTCTTTGGCATCCATCTGATCTCTCTGTCAGACCTGTCATGCCCAGCAGAAAGGTTGATAAAGTCTCAGAAGTCATTCCTTCACTTCCTTTTGAAGCGTTGCAAGCATCTGATTTTGTCAAGATGCCTAAAGAGCAATTGGAGGCAGTACACAACCGAATTTTAGCCATTTTGAATGGGAATACCAGCATTGGAGAGAAACAGAATGTGATTAGGTACCTCGAGATGTTGAGCAGTAATCCTGATGCAGCCAATATCTTGACCAACGGTCCAATAATGCTCATGCTTGTAAAATTGCTACGTCAATCCAAGGCATCAGCTTTGCGTGTTCAACTTGCTTCACTGATCGGTTTGTTGATTAGGCACTCTACTTTTGTTGATGACAGTTTGGCCAATTCTGGAATTTTAGGTTCATTGACGGATGGCCTTAGAGACAAACAGGAAAAAGTGAGGAGGTTTTCCATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCCACTCAAAATGCGGACTGCAGAGATAATAATCAACTTGAATCTCCATCAAAGGACAATAGGACTACGTCTGGCTGGCAGGTTCCAAATTCATTAATTTCCTTTGTGACTTCAATGTTGAGGAAAGGGGAGGATGACATAACTCAATTGGCAGCAGGGAAACAAGAAAGCATGAGGCTTACTGCAGGGTCATGTTTGGTGCGTTTAGTTCGTTTTAATCCTCCTAGCATTCAGTCGGTTATCGAGAAACTCTCATTCAAGGACCTAGCTTCTGCTCTTGTCAAGGGCAGTCCACGAGAGCAGCAAATCAGCTTAAATCTTCTTAACATGGCAATGCTAGGAAGTCATATGTTCACAAATATAGGAAGATACCTTGTACCACTTGCGGAGGATAAGAATCTAATCCCAAGCATTTGGGCTCTTGTGGAGCAGGGTACTGAAGTTTTAAAAGGAAAGGCACTTGTGTTTGTGGCTCTCCTCTGTAAGCACGGTAGGAGGTGGCTTCCACACTTCTTTTGTAGCCAAAAGTTACTTTCCGTGGTAGACAGGCTGGGAAAAGAGAAGGATGCCTATGTGCGGCAGTGTTTAGAGGCGTTTGTGCATATTGTGGCATCTACCATTCCAGGTTTGCTGGATATAATAACAGCGGATATCCAGCAAATGATGGGAGGAAGGCGCCATGGACATATCTCTGCCCTTACCAGCAGATCTACTCCAAAAACCAACATTCATTTGTTTCCTGTTGTTCTCCATCTTCTTGGAAGTTCAACTTTTAAGCACAAAGTGGTGACACTTCAAGTCCTACGGCAGTTGGCCAATCTAATTAAACTCGTGGAGACACCGTTTCAGGGAAGAGATGATTTCCAAATAACCCTTCTTCGAATTTTGGAGTCTCTGACGGAGGAATCTACTGTGATTCTTGGCAATCCTGACATTTTCATACGTGAAATCCTCCCGAGTTTAACAGTTCTCTACAAGGGTAACAAGGATGGCGATGCCAGATTTTTGTGCCTTAAAATTTTTTTCGATGTGATGATTATTCTTTTGAGTGAACCAATCGAAGAAGAGCAAAGATTGAAGGATCTGAAATTCATATCAAATACACGTTTTCTTCCTCTCTACCCGACCTTGATCGAAGATGAAGACCCTATTCCTATCTATGCACAGAAGCTTCTTGTCATGCTACTAGAGTTCAGTTTTATTACAATTCCAGACATTCTACATCTGAAGACGATTTCTCAATGCTTTGAGTTCTTGCTTGGTGATCTATCAAATGCAAATGTGAATAATGTTAAGCTCTGTCTTGCTCTGGCTTCTGCTCCTGAAATGGAGTCCAAGTTACTCTCTCAATTGAAAGTTGTTAGGAGGATTGGCAACTTTCTTGAGTTTATTTGTGCAAAGGGTATGGAAGATTTGCTGGAACCAACTCTTGGGCTGTGTAGGGCTTTTCTAGCACGTTCAGTCTGCTGTGCAAAAGGTTTCAGCTACACAACAGAACCAATTCTCTTAGGTGACTGTCCTCCCGAGGCAAGTGGTGTTGTTGATCCCCAGCAATGCATAAGAGATATAGCGGACTTTGGAAGCAATGTTGGAGTCTTGCTAGCGTTGAGTGCCTCTGCAGAAACCAATATTGCTGATATAGGTTCTGAATGTGTAGTTTTATTGCTTAAGGCAGCTCCTAGAGAAGCCACCACTGGTCTACTAACCAATCTCCCCAAGGTCAGTGTAATCCTAGAGTCCTGGAGTAAAGGCATCCCTCAGTTAGTTGTGCAGAGAATGCTTCGTGCTCTAGGTTATGCTTGCAAGCAGTACTTACTGCATGCTATGATATTATCAATATCCATACCAGAGATTTCAAGAATTGAAGTAATAGTTTCTGAACTCAAGAGTTCAGGTGTGCCTGCTTTAGCCAAAACTGCTGGGTTGGCAGCCTTGGAATTGCAGCGGCTGCCTCGCTGCATTTGA 4011 0.4236 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKTKVLQEVRILHSLDHKNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDSQLPEDSVHDLAYDLVKALQFLHSIGIIYCDLKPSNILLDENGCAKLCDFGLARKLKDISKTPSSLLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYAGRPPFVGREFTQLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKFTLLPLPPQPAFDDMLELHAKPCLSERNGDKSSHNRTPPKYRERDVKGVLKKDENSVLGSRGIETPTRATPNGHRTQTKGSGRTIEGKQKDSSNISKGVNLLRLSKIAKSNLQKENEKENYRRPLPNNSENDSEVKIENTDMELDFNENSEDDAHEETDCSEHTASVPDEKMDNHFQNQGKAEEIENNMHPLDTPSVVSTPVSDDARSFDQESTPDRPDISAISPSVSPQVRKHKPREDSASGLDSDSSRSSNNLSQVLWHPSDLSVRPVMPSRKVDKVSEVIPSLPFEALQASDFVKMPKEQLEAVHNRILAILNGNTSIGEKQNVIRYLEMLSSNPDAANILTNGPIMLMLVKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDKQEKVRRFSMAALGELLFYISTQNADCRDNNQLESPSKDNRTTSGWQVPNSLISFVTSMLRKGEDDITQLAAGKQESMRLTAGSCLVRLVRFNPPSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNMAMLGSHMFTNIGRYLVPLAEDKNLIPSIWALVEQGTEVLKGKALVFVALLCKHGRRWLPHFFCSQKLLSVVDRLGKEKDAYVRQCLEAFVHIVASTIPGLLDIITADIQQMMGGRRHGHISALTSRSTPKTNIHLFPVVLHLLGSSTFKHKVVTLQVLRQLANLIKLVETPFQGRDDFQITLLRILESLTEESTVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLKDLKFISNTRFLPLYPTLIEDEDPIPIYAQKLLVMLLEFSFITIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFICAKGMEDLLEPTLGLCRAFLARSVCCAKGFSYTTEPILLGDCPPEASGVVDPQQCIRDIADFGSNVGVLLALSASAETNIADIGSECVVLLLKAAPREATTGLLTNLPKVSVILESWSKGIPQLVVQRMLRALGYACKQYLLHAMILSISIPEISRIEVIVSELKSSGVPALAKTAGLAALELQRLPRCI 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 283 357 - -
Sebi169g00135 1336 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00135 1336 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Sebi169g00135 1336 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00135 1336 Gene3D Transferase(Phosphotransferase) domain 1 1 296 - -
Sebi169g00135 1336 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Sebi169g00135 1336 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 409 433 - -
Sebi169g00135 1336 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Sebi169g00135 1336 CDD STKc_ULK4 3 257 - -
Sebi169g00135 1336 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 733 1333 IPR044591 GO:0000911|GO:0000914|GO:0008017
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 452 468 - -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 370 385 - -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 283 318 - -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 370 397 - -
Sebi169g00135 1336 FunFam Aurora kinase A 1 81 - -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 416 433 - -
Sebi169g00135 1336 Gene3D - 558 905 IPR011989 -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 446 517 - -
Sebi169g00135 1336 MobiDBLite consensus disorder prediction 320 357 - -
Sebi169g00135 1336 SUPERFAMILY ARM repeat 558 1024 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00135 Sebi-Chr169 1617003 1623150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00135 1 246 AGC Kinase Gene Family AT1G45160 33.696 3.63e-37 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Sebi169g00135 Pkinase 2.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00135 K17545 - gmx:100817590 2384.76