Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00128 ATGGGGTGTGTGTTTGGGAAAGGGTCATCGGCGGAGGAGAGGAGAGAGGAAGTGAGAGAAGCTAAAACAGCTGAGGTGGCGGCAGGGTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATCAATGGATTGACCCCAAGGAGAGCTGACACATTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCCAGGGATACGTTAACAGGGAAAATTGTTGCCCTGAAGAAGGTCCGTTTTGACAATTTAGAGCCTGAGAGTGTGAAATTCATGGCCAGAGAGATTCTGATTCTACGTCGTCTGGACCATCCCAATGTTGTCAAACTGGAAGGCTTAGTGACTTCTAGAATGTCATGCAGCTTATATCTTGTGTTTGAATACATGGTGCATGATCTGGCTGGACTTGCTACAAATCCTGCAATTAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAACTATTTTCGGGGCTGGAACATTGTCACAATCGCCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTCATTGATAATGAAGGAGTTCTTAAGATTGCTGATTTTGGATTAGCTTCCCTCTTTGATCCTGATCACAAGCACCCAATGACCAGTAGAGTGGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGGGCCACTGAATATGGTGTAGGAGTTGACCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTGTTGGCTGGAAAGCCTATTATGCCTGGTCGAACAGAGGTGGAGCAGCTACATAAAATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGTCAAAGTTGCCACATGCTACCATTTTTAAACCCCAACAGTCATACAAGCGATGCATAACAGAGACTTTTAAGAATTTTCCCCCATCATCCCTGCCACTAATTGAGACTCTTCTTGCAATTGATCCAGCTGAACGTCTAACTGCCACTGTCGCATTGCATAGTGAATTCTTTACAACAAAACCGTATGCTTGTGATCCCTCTAGCCTTCCAAAATATCCTCCCAGCAAGGAGATGGATGCAAAGCTACGGGATGAAGAAGCTAGAAGGATGAGAGCAGCTGGAAAAGCCAATGCTGATGGTGTTAAGAAATCTCGTCCACGTGATCGAGTTGGGAGGGGAATTCCAGTTCCAGAGGCCAATGCCGAACTGCAAGCAAACATCGATAGACGGCGAATGATCACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAGCTCTAGGCTATCCTTTAGGTTCTTCACATCACATGGATCCAGTATTTGATCCTCCTGATGTTCCATTTAGTTCCACAAACTTCTCACAACCTAAAGCAAATATCCAAACCTGGTCAGGCCCACTGGTAGATCCTGGTGGTATGGGTGCACCAAGGAGAAAGAAGAAACATGGAAGTTTCTACATAGTCTGCTGTTGTTGGTTGCTACAAGACTGTTTTGGTGCGCCACCACCGGAACCACCACCTATGCCACCGTCTCCACCACAAGCTCCACCTCTACCTCCACCAAATCCAGTCGGCCCACCCGGACCTCCCATTCCACCGCCACCGGAACCTCCTGGTCAATATTGGGCTCCTCCTTATCCTGGGCCTCCAATTGGCCCTCCTGCGCCTCCTGGTGGTCCAATTGGGCCTCCCGATGGGCCTCCTGGTGGCCCACCCGGTCCTCCACCTCCTTATTAA 1758 0.4772 MGCVFGKGSSAEERREEVREAKTAEVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMVHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGVLKIADFGLASLFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCITETFKNFPPSSLPLIETLLAIDPAERLTATVALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRMRAAGKANADGVKKSRPRDRVGRGIPVPEANAELQANIDRRRMITHANAKSKSEKFPPPHQDGALGYPLGSSHHMDPVFDPPDVPFSSTNFSQPKANIQTWSGPLVDPGGMGAPRRKKKHGSFYIVCCCWLLQDCFGAPPPEPPPMPPSPPQAPPLPPPNPVGPPGPPIPPPPEPPGQYWAPPYPGPPIGPPAPPGGPIGPPDGPPGGPPGPPPPY 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00128 585 MobiDBLite consensus disorder prediction 372 394 - -
Sebi169g00128 585 PANTHER CELL DIVISION PROTEIN KINASE 51 341 - -
Sebi169g00128 585 FunFam probable serine/threonine-protein kinase At1g54610 136 377 - -
Sebi169g00128 585 FunFam probable serine/threonine-protein kinase At1g54610 40 135 - -
Sebi169g00128 585 MobiDBLite consensus disorder prediction 372 392 - -
Sebi169g00128 585 ProSiteProfiles Protein kinase domain profile. 53 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00128 585 PRINTS Proline rich extensin signature 544 561 - -
Sebi169g00128 585 PRINTS Proline rich extensin signature 505 526 - -
Sebi169g00128 585 PRINTS Proline rich extensin signature 526 542 - -
Sebi169g00128 585 PRINTS Proline rich extensin signature 563 585 - -
Sebi169g00128 585 MobiDBLite consensus disorder prediction 511 585 - -
Sebi169g00128 585 Gene3D Phosphorylase Kinase; domain 1 41 135 - -
Sebi169g00128 585 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Sebi169g00128 585 Pfam Protein kinase domain 53 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00128 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Sebi169g00128 585 SUPERFAMILY Protein kinase-like (PK-like) 48 343 IPR011009 -
Sebi169g00128 585 MobiDBLite consensus disorder prediction 464 486 - -
Sebi169g00128 585 Gene3D Transferase(Phosphotransferase) domain 1 136 377 - -
Sebi169g00128 585 CDD STKc_CDK9_like 53 337 - -
Sebi169g00128 585 SMART serkin_6 53 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00128 Sebi-Chr169 1555511 1562018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00128 48 375 Core Cell Cycle Gene Families AT5G10270 52.907 9.03e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sebi169g00128 Pkinase 8.8e-69 CL0016