Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00111 ATGTTTGGTTACTGTCGCAGAGCCTTGCTCTGCCCAAACCTCAACCCCATTATCAGAATCAGAACCTCCTTACCAATCCCAGCACTCTCCTATCTTCTTCTCCAACCTTTTTCCTCTTCCAAAGAACACTCTTTTACCTTCAATTACCTTGTAAAAATTTGTGGGTTCTCCCCAGAAACGGCTTCCAGACTCTCTAACCGAGTTCGTCTCAACAACTCAGACAGACCCGACTCGGTCCTTGCCTTGTTCAGAAGCCACGGCTTCTCAAACGCTCAGTTATATGGGATCATCCGAACCTGCCCAAAACTTCTTACTTACGATCCCTACAAGACCATTCTTCCCAAGTTCAATTTCCTTCTCTCAAAGGGTGCTTCAAGTTCTGACCTTGTGCACATCGTGACCAAGAATCCCATAGTCCTGCGTTCAAGCTTGGAGAATACCATTTCCCCGTGTTATGATTTGGTCAAACGATTCAGACTTTCTGATGAGTCCACTTTGCTCTCTATAAAAGCTTATGCTAGCTTGATTTATTCTAAGAACCTAACACAGAATATTCAACTGCTGCTTGACAATGGGGTCCCTGAATCAAATGTTGCTTTTTTGTTTCGTCTTCATAATGGGTATCACACAATCACTGAGCATCATGCTGTGTTTAAGAAGGCAGTGGAAGAAGTAAAGGAATTGGGAATCAACCCCAACAAATCAACTTTCATTGTAGCAATGCGTGCTAAGATTGCGAAAGGATACCCGTGGCCGTGGGAAAGGAGGATCAATTTGTATAAAAAATGGGGTTGGTCTGAAGAAATTATTGTTTCAGCATTTGTGAGGTATCCATGGTGCATGCTGGCATCTGAGAATAAAATTAAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGAGTTCTTTGATCCTCGCCAAACACCCATTACTAATTTTGTTGAGTTTGGAGAAAAGAGTAATTCCAAGGGCTCTTGTCTTGCAATTTCTTCAATCCAGAGGTTTGATTAAGGATGCAAAATCCATCAGTTATTATACAGTTAATGAGGAGAAGTTCTTGCTGAAATTTGTAAATTGCTTCGAGGAGGAAGCTTCTCAGCTGTTGAAGCTGTATGATGGGAAAAATTATCTTCCAAGATAA 1143 0.4199 MFGYCRRALLCPNLNPIIRIRTSLPIPALSYLLLQPFSSSKEHSFTFNYLVKICGFSPETASRLSNRVRLNNSDRPDSVLALFRSHGFSNAQLYGIIRTCPKLLTYDPYKTILPKFNFLLSKGASSSDLVHIVTKNPIVLRSSLENTISPCYDLVKRFRLSDESTLLSIKAYASLIYSKNLTQNIQLLLDNGVPESNVAFLFRLHNGYHTITEHHAVFKKAVEEVKELGINPNKSTFIVAMRAKIAKGYPWPWERRINLYKKWGWSEEIIVSAFVRYPWCMLASENKIKAVMEFWVNHMGWSSLILAKHPLLILLSLEKRVIPRALVLQFLQSRGLIKDAKSISYYTVNEEKFLLKFVNCFEEEASQLLKLYDGKNYLPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00111 380 Gene3D Transcription termination factor 3, mitochondrial 164 371 IPR038538 -
Sebi169g00111 380 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 SMART mt_12 303 337 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 FunFam Mitochondrial transcription termination factor-like 144 365 - -
Sebi169g00111 380 PANTHER CGI-12 PROTEIN-RELATED 41 363 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 Pfam mTERF 80 231 IPR003690 GO:0003690|GO:0006355
Sebi169g00111 380 Pfam mTERF 218 353 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00111 Sebi-Chr169 1362714 1363856 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi169g00111 mTERF 7.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00111 K15031 - gmx:102663105 386.341