Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00110 ATGTTTGGTTACTGTCGCAGAGCCTTGCTCTGCCCAAACCTCTTTCCCATTATCAGTAACAGAACCACCACCTTACCAATCCCAACACCCTCCTATCTTCTTCTCCAATTTTTTTCCTCTTCCAAAGAAGAACACTCTTTTACCTTCAACTACCTCGTTAACAATTGTGGGCTCTCCCCAGAAACTGCTTCCAAAATCTCCAAACAAGTTCATCTCAACAACTCAGACAGACCCGACTCAGTCCTCGCCTTGTTCACAAGCCACGGCTTCTCAAACGCCCATTTACATGGAATCATCCGAACCTGCCCAAAACTTCTCTCTTTCGATCCCAACAAGACCGTTCTTCCCAAGTTCAATTTCTTTCTCTCAAAGGGTGCTTCAAGTTCCGACCTTGTGCAAATCGTGACCAAGAATCCATTCGTCTTGTATCAAAGCTTGGAGAATACCATTACCCCGTGCTATGATTTCGTAAAAAGATTCTTGCTTTCTGATGAGTTCACTTTGTCTTCTGTAAGACGCTATGCTTGCTTGATTTATTCTAAGTACGTAGCACATAATATTCAACTGCTGCTTGAGATTGGGGTCTCTGAATCAAACGTTGCTTATATGCTTCGTAATTGGCCATCCCCAGTCACTGAGTCTCCTTCTTTGTTTAAGAAAGTAGTGGAAGAAGTAATGGAATTGGGATTCAACCCCAAGTCAACATTGTTCATTGTAGCAGTGCGTGCTAAGGTTATGAAAGTCATGTGGAAAAGGAGGATCAATTTGTATAATAAATGGGGTTGGTCTGAGGAAATTGCTGTTTCAGCATTTGTGAAGTATCCATGGTGCATGTTGGCATCAAGGAATAAAATTGAGGCAGTGATGGAGTTTTGGGTCAACCACATGGGTTGGGATTCTATGGTGCTTGCCAAATACCCAATACTTCTAATGATGAGTTTGGAGAAAAGAATTATTCCTAGGGCTTTTGTCTTGCAATTTCTTCAATCCAGAGGTTTGATTAAGGATGTAATATTGCTCACACCGTTTAGAGTTACTGAAAATGAATTCTTGCAGAAATTTGTGAATCGCTTTGAGGAGGAAGCCACTCAGCTGTTGAAGCTGTACACAGATGCAATGCAAGTGGCGCCTTTGAAATAA 1140 0.4184 MFGYCRRALLCPNLFPIISNRTTTLPIPTPSYLLLQFFSSSKEEHSFTFNYLVNNCGLSPETASKISKQVHLNNSDRPDSVLALFTSHGFSNAHLHGIIRTCPKLLSFDPNKTVLPKFNFFLSKGASSSDLVQIVTKNPFVLYQSLENTITPCYDFVKRFLLSDEFTLSSVRRYACLIYSKYVAHNIQLLLEIGVSESNVAYMLRNWPSPVTESPSLFKKVVEEVMELGFNPKSTLFIVAVRAKVMKVMWKRRINLYNKWGWSEEIAVSAFVKYPWCMLASRNKIEAVMEFWVNHMGWDSMVLAKYPILLMMSLEKRIIPRAFVLQFLQSRGLIKDVILLTPFRVTENEFLQKFVNRFEEEATQLLKLYTDAMQVAPLK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00110 379 Gene3D Transcription termination factor 3, mitochondrial 145 368 IPR038538 -
Sebi169g00110 379 PANTHER CGI-12 PROTEIN-RELATED 43 358 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 Pfam mTERF 182 350 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 Pfam mTERF 82 166 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Sebi169g00110 379 FunFam Mitochondrial transcription termination factor-like 146 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00110 Sebi-Chr169 1357541 1358680 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi169g00110 mTERF 2.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00110 K15031 - gmx:102663105 387.882