Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00108 ATGTCATCATCAATGGCTTGCCATTCCCTCAACATTGATGTTGAAGAGATTCAAAGCCCCCAGTCCCACGTTTCTTCTGACTTTAACTCCACAAGTCCTCGGTCACCCACACCTCCGGAAAATGAATGGGTTCCAAATTGTGTTGAAGAATTGAAGCCCAAGGTTGGACAACAATTTGATACTTTAGAAGAAGGTAAAAATTTTTACAAAAGGTACGCACATAATGTTGGATTTAGTGTGCGTTGCTCATCGGAAACTAAAGATAAAAATGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACAAACCAGATAAGGAAAAAGTTGGGGAACAAAGCAACTCAACTATTAAGTCTAGGAGAAGGAGTCTTATAAGAGAAGGATGCAATGCAAAGGCCGTTTTCAAATTGGTAGAGGAAGGTAAATATGAGCTCATTCGATTTCATGAAAGTCATACACATGTACTCGCTTCACCTATGAAGAGACCGTTTCAAGATCAGCAAGAAAGAACAACCTCAAGATCAGAAAGTGAGAATTCTTTTTATGGTAACTTTTTGAATCCTCATGTTAGCCTTGTTGAATTTTGGATGAGGTTTGATTCTGCAATAGAAGCACAAAGGCAGAAGGAGTTACTTGCTGATAATGATTCACTTCATTCCACACCAAAATTGAAGTTGGATCGCGATTTAGAGAAGCATGGAAGCAATGTTTATACTCATGAGAATTTTTATATATTTCAGAATGAGTTATAG 762 0.378 MSSSMACHSLNIDVEEIQSPQSHVSSDFNSTSPRSPTPPENEWVPNCVEELKPKVGQQFDTLEEGKNFYKRYAHNVGFSVRCSSETKDKNGVKRWKYFVCSKEGYKPDKEKVGEQSNSTIKSRRRSLIREGCNAKAVFKLVEEGKYELIRFHESHTHVLASPMKRPFQDQQERTTSRSESENSFYGNFLNPHVSLVEFWMRFDSAIEAQRQKELLADNDSLHSTPKLKLDRDLEKHGSNVYTHENFYIFQNEL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00108 253 MobiDBLite consensus disorder prediction 15 37 - -
Sebi169g00108 253 Pfam FAR1 DNA-binding domain 67 159 IPR004330 -
Sebi169g00108 253 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 25 178 - -
Sebi169g00108 253 MobiDBLite consensus disorder prediction 15 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00108 Sebi-Chr169 1347920 1349607 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi169g00108 FAR1 2.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00108 - - ccaj:114916444 264.618