Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00075 ATGGCTTTTGAGCCATTGGTTTGGTATTGTCGGCCAGTTGCAAATGGAGTATGGACAAAAGCAGTACAGAATGCCTTTGGTGCTTACACTCCTTGCGCAACCGACTCTTTGGTGATCTCCGTTTCTCATTTGATACTTCTAGGCCTGTGCATCTACCGCATATGGTTGATCACGAAGGATTTCAAAGTCAAGAGGTTCCGTTTAAATTCAAACCTCTACAATTATGTTCTGGGGGTTTTAGCTGCATATTGTGTGGCAGAGCCATTATACAGATTGATCATGGGAATATCAGTTCTAAATTTAGATGGGCAGACTGGTCTTGCTCCATTTGAGATAATTTCACTGATCGTTGAGGCTCTTGCTTGGTGCTCTATGTTGGTTTTGATTTGGATTGAAACTAAAGTCTACGTCTGTGAATTCCGATGGTTTGTCAGATTTGGTTTGATTTATGCTATTGTAGGGGATGCTGTCTTGATCAATCTCATCATTTCTGTGAAGGAGTTCATTAGCAGATCTGTGCTGTATTTGTACATCAGCGAGGTGGTCTGCCAGGTTTTGTTTGGAATACTTTTGCTTGTCTATGTTCCTACTTTGGATCCTTATCCAGGTTATACTCCCATTGGAAGTGAAATGGTTACTGATGCTGCATATGATGAACTCCCTGGAGGAGAGCTGATATTTCCTGAGAGGCGTGCTAACATAATGTCAAAAATAATTTTTTCTTGGATGAATCCCATGATGAAACTAGGATATAAAAGACCACTTACAGAGAGAGATATATGGAAATTAGATACGTGGGATCGGACAGAGACACTGAACAATATGTTCCAGAAATGTTGGGCTGAGGAGTCTCGGAAGTCAAAGCCTTGGCTCTTAAGAGCATTAAATGCAAGCCTTGGAGGAAGGTTTTGGTATGGAGGCTTTTGGAAGATTGGCAATGATGTTTCCCAATTTTTGGGCCCAATTATTTTGAATCAGCTGCTACAGTCTATGCAAAATGATGATCCGGCCTCGATTGGTTATGTTTATGCCCTCTCAATATTTCTCGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTTATGCGTGTTGGTTTCCGGCTAAGATCAACACTGGTGGCTGCTGTATTTCGCAAGTCTCTAAGGCTTACTCACGAAGCGCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTTTGTGGTCAGCGCCACTTCGAATTACTGTTGCTATGTTTCTTCTTTACCAACAACTAGGTGTTGCTTCCCTTCTTGGTGCACTGATGCTAGTTCTTATGTTTCCACTACAGACATTTGTCATTAGCAGAATGCAGAAGTATTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGAATGTCCGAAATGATGAACTATCATGGTTTCGAAAAGCATCATTACTCGGAGCGTTCAATGGATTCATGCTCAATAGCATCCCAGTTTTTGTAACTGTGGTTTCATTTGGAATGTTCACCTTACTTGGAGGGGATTTGACACCTGCAAGAGCTTTCACATCACTTTCTCTGTTTGCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATATTATAACTCAGGTGGTTAATGCAAATGTATCTTTGAAGCGTTTGGAGGATTTGCTCTTAGCAGAAGAGAGAGTACTTCTGCCAAATCCACCTCTTGAGCCTAGCTTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCGAAGGCAGAGAGGGCCACATTGTCAAACATAAATTTGGATATACCCGTTGGTAGCCTAGTTGCAGTTGTTGGCAGCACAGGAGAAGGGAAGACATCACTCGTATCAGCAATGCTTGGAGAACTTCCTCCACTTGCAGATTCAACTGTTGTTATGAGAGGAACAGTTGCTTATGTGCCCCAAATTTCGTGGATTTTTAATGCAACTGTACGGGATAATGTTTTGTTTGGTTCTGTCTTTGACCCGATAAGATATGAAAGGGCAATAGATGTGACTGAACTGCATCACGACCTTGAGTTACTGCCAGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATTAGCGGTGGCCAGAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTTCATCTTTGATGATCCCCTAAGTGCTCTGGATGCACATGTGGCTAGACAGGTTTTTGACAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGGGTTCTTGTTACAAATCAGCTTCATTTTCTTTCACAGGTTGATAGAATCATTTTGATCCATGAAGGTATGGTGAAGGAGGAGGGAACCTTTGAGGAACTCTCTAACCAGGGACCGTTGTTCCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTATGAAGAAGAAAAGCTAGATACTGAAACCACTGATCAGATTCAGAAGTCCTCTTCAAAACCAGTGGCAAATGGAGCAATTGATGATTATGCAAAAAGTGGAAGTAAACCAAAAGAAGGAAAGTCCATCCTTATTAAACAGGAGGAACGGGAAACAGGTGTTGTCAGTTGGAATGTTCTAATGAGGTACAAAAATGCATTAGGAGGCTCTTGGGTGGTTCTAATACTCTTTGCATGCTATGTCTTAACTGAAGTGTTACGAGTGTCAAGTAGCACATGGTTAAGCCATTGGACTGATCAGGGTGCTTCAGAAGGTTATAATGCTGGCTTCTACAATCTGATATATGCATCTCTATCATTTGGTCAGGTTTTGGTAACTTTAACAAATTCTTACTGGTTAATCATATCAAGTCTTTATGCTGCCAGAAGGTTGCATGAAGCCATGCTTCACTCCATATTACGAGCTCCCATGCTCTTCTTCCACACAAATCCACTTGGAAGGGTAATCAACAGGTTCGCGAAGGATCTAGGCGACATCGATCGCAATGTTGCCCCATTTGTCAACATGTTTCTAGGTCAAGTGTCCCAGCTTCTTTCAACCTTCATCCTGATAGGGATCGTCAGCACAATGTCCTTGTGGGCGATAATGCCATTGTTGGTATTGTTTTATGGAGCATATCTATACTATCAGAGCACAGCTCGTGAAGTGAAGCGATTAGATTCAATTAGCAGATCTCCTGTTTACGCACAATTTGGAGAAGCGCTAAATGGTTTATCGACAATTCGTGCTTACAAAGCTTACGATCGAATGGCAGATATAAATGGGAGATCAATGGACAACAACATCCGATTCACACTGGTGAACATGAGTGGAAACCGATGGCTTGCAATCCGGTTGGAAACCCTAGGAGGTCTCATGATATGGTTCACTGCAACCTTTGCGGTAATGCAGAATGGTAAAGCAGAGAACCAGCAGGAATTCGCATCCACCATGGGATTGCTTCTCAGTTATGCTTTGAACATCACCAGCTTGCTCACTGGTGTGCTCAGGCTTGCAAGTTTGGCCGAGAATAGTTTAAATGCAGTTGAGAGGATTGGAACTTACATAGATTTGCCTTCAGAGGCTCCTTCTGTGATTGAAGATAATCGCCCTCCCCCTGGCTGGCCTTCGTCAGGGTCGATCAAATTCGACGATGTTGTTCTTCGCTACAGGCCTGAACTTCCTCCTGTACTGCATGGCCTCAATTTCTCGATTTTCCCAAGCGATAAGGTTGGCATTGTTGGGAGGACAGGCGCGGGAAAATCCAGCATGCTCAATGCTCTGTTTCGAATTGTGGAATTGGAAAGAGGGAAAATTTTAATTGATGATTGTGATATTGGGAAGTTTGGGTTGGCTGATTTACGGAAAGTTCTTGGCATTATACCACAGTCTCCCGTTCTCTTTTCAGGAACTGTGAGATTTAATCTTGATCCATTTAACGAACACAATGATGCTGACCTTTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAGTTCTCTGGGGCTGGATGCTGAGGTATCTGAGGCAGGTGAGAACTTCAGTGTTGGACAGAGGCAACTTTTGAGTCTTTCCAGGGCTTTATTGCGGAGATCTAAGATATTAGTACTTGATGAGGCAACTGCAGCAGTTGATGTTAGAACAGATGCACTCATACAGAAAACAATCCGAGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTTAACACCATTATTGATTGTGATCGGATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATATGATACCCCTGAGGAGCTGCTGTCAAATGAAGATAGTGCTTTCTCTAAGATGGTGCAAAGTACTGGAGCTGCAAATGCCCAATACTTACGCAGCTTAGCACTTGGTGGGGACAAATCAGAAAGAGAAGGGAACAAGCATCTAGATGGTCAGAGAAAATGGTTGGCTTCTTCTCGGTGGGCTGCTGCAGCCCAATTTGCTCTTGCTGTCAGTCTCACGTCATCACATAATGACCTACAACGATTGGAAGTAGAAGATGAGAACAGTATTCTCAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAGAGCAGCGCCAAATATCCCCAGAGGGATGGTGGTCATCGCTTTACAAGATGATTGAAGGTCTTGCTATGATGAGCAGATTGGCCAGGAACAGGCTCCATCAATCAGACTATGGTTTTGAAGACAGATCAATTAACTTTGATCAAGTTGATATGTAG 4866 0.4281 MAFEPLVWYCRPVANGVWTKAVQNAFGAYTPCATDSLVISVSHLILLGLCIYRIWLITKDFKVKRFRLNSNLYNYVLGVLAAYCVAEPLYRLIMGISVLNLDGQTGLAPFEIISLIVEALAWCSMLVLIWIETKVYVCEFRWFVRFGLIYAIVGDAVLINLIISVKEFISRSVLYLYISEVVCQVLFGILLLVYVPTLDPYPGYTPIGSEMVTDAAYDELPGGELIFPERRANIMSKIIFSWMNPMMKLGYKRPLTERDIWKLDTWDRTETLNNMFQKCWAEESRKSKPWLLRALNASLGGRFWYGGFWKIGNDVSQFLGPIILNQLLQSMQNDDPASIGYVYALSIFLGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPLRITVAMFLLYQQLGVASLLGALMLVLMFPLQTFVISRMQKYSKEGLQRTDKRIGLMNEILAAMDTVKCYAWESSFQSKVQNVRNDELSWFRKASLLGAFNGFMLNSIPVFVTVVSFGMFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQVVNANVSLKRLEDLLLAEERVLLPNPPLEPSLPAISIKNGYFSWDAKAERATLSNINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPPLADSTVVMRGTVAYVPQISWIFNATVRDNVLFGSVFDPIRYERAIDVTELHHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGMVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEEKLDTETTDQIQKSSSKPVANGAIDDYAKSGSKPKEGKSILIKQEERETGVVSWNVLMRYKNALGGSWVVLILFACYVLTEVLRVSSSTWLSHWTDQGASEGYNAGFYNLIYASLSFGQVLVTLTNSYWLIISSLYAARRLHEAMLHSILRAPMLFFHTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGRSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTATFAVMQNGKAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSVIEDNRPPPGWPSSGSIKFDDVVLRYRPELPPVLHGLNFSIFPSDKVGIVGRTGAGKSSMLNALFRIVELERGKILIDDCDIGKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRSSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEDSAFSKMVQSTGAANAQYLRSLALGGDKSEREGNKHLDGQRKWLASSRWAAAAQFALAVSLTSSHNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLEQRQISPEGWWSSLYKMIEGLAMMSRLARNRLHQSDYGFEDRSINFDQVDM 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00075 1621 FunFam ABC transporter C family member 2 882 1220 - -
Sebi169g00075 1621 MobiDBLite consensus disorder prediction 847 882 - -
Sebi169g00075 1621 CDD ABCC_MRP_domain1 615 815 - -
Sebi169g00075 1621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1472 IPR027417 -
Sebi169g00075 1621 FunFam ABC transporter C family member 2 279 600 - -
Sebi169g00075 1621 SMART AAA_5 1265 1458 IPR003593 GO:0016887
Sebi169g00075 1621 SMART AAA_5 642 825 IPR003593 GO:0016887
Sebi169g00075 1621 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Sebi169g00075 1621 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524|GO:0016887
Sebi169g00075 1621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Sebi169g00075 1621 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Sebi169g00075 1621 Gene3D - 609 866 IPR027417 -
Sebi169g00075 1621 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Sebi169g00075 1621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 838 IPR027417 -
Sebi169g00075 1621 CDD ABCC_MRP_domain2 1237 1457 - -
Sebi169g00075 1621 Gene3D - 1222 1475 IPR027417 -
Sebi169g00075 1621 FunFam Multidrug resistance-associated protein member 4 1223 1475 - -
Sebi169g00075 1621 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 306 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00075 1621 Gene3D ABC transporter type 1, transmembrane domain 274 600 IPR036640 GO:0005524|GO:0016020
Sebi169g00075 1621 Gene3D ABC transporter type 1, transmembrane domain 882 1220 IPR036640 GO:0005524|GO:0016020
Sebi169g00075 1621 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Sebi169g00075 1621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Sebi169g00075 1621 SUPERFAMILY ABC transporter transmembrane region 916 1219 IPR036640 GO:0005524|GO:0016020
Sebi169g00075 1621 SUPERFAMILY ABC transporter transmembrane region 289 595 IPR036640 GO:0005524|GO:0016020
Sebi169g00075 1621 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00075 1621 Pfam ABC transporter transmembrane region 918 1161 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00075 1621 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Sebi169g00075 1621 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1479 - -
Sebi169g00075 1621 FunFam ABC transporter C family member 2 609 855 - -
Sebi169g00075 1621 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00075 Sebi-Chr169 960675 976836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00075 1236 1479 Calmodulin-binding Proteins AT2G36910 31.200 9.09e-30 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00075 - - gmx:100795004 2855.47