Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00062 ATGTGTTTCGTGGCTCGGACTTGTGGAGCGAAATTGCAGAACGAAATTATTTCCTTTCAACTCACAACGTGTGGCTCCATAGTGCAGTTCCTTCCTGGATTCCAGGGACCCCTTCCTTTTCTGCTTGAAACCGGGTATGTGGGAGTGGGTGAAACAGAGGATGTACAAACTTTCTATTACTTCATTGAGTCAGAGAACGATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACCGGTGGACCTGGTTGCTCTGCCTTGTCTGGTCTTGCCTTTGAAATAGGTCCACTTGCATTCAAATACGAGGAATATAATGGGAGCCTCCCTAGTTTGGTGTTGAGGCCACACTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCAGTTTCCACGGGGTTTACTTATGCCACAACAGAGTCTGCTGCTCAACGAAGCGACTGGTTACTAGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTGTCAAATGAAGTTTACATTGGTGGTGATTCCTACTCTGGCATTCCTATTCCAGTAATTGTTCAAGAAATTTCCCAAGGAAATGATAAAGGGGTTCAGCCATGGATAAATCTCCAGGGGTACCTGCTAGGGAATGCCTTAACAACTCGAAGGGAGAAAAACTATCAAATCCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGAGTCACTGCAAAAGAATTGTAAAGGAGAGTATGTAAATGTAGACACCAGGAATGTATTGTGTTCAAGAGATATGAACTCATACAACGAGGCTATATCAGGACTTAATAAGGCACATATTTTGGAGCCTTCATGCCAGTGGCTTGATAGTACTCAAGCTTCTTGGAGGAGATCTCTAATTAAGAAATATCCCTCCAAGTACCTCAATACTCATCTCAAATTGCCAACCTTAAGCTGTCGGAGTTATGTATATTTCCTTTGCGGTTATTGGGCCAACGATGATAGTGTTCGCAAAGCACTGCACATACGTAAGGGAAGTATTGGGAAGTGGCGTCGTTGTACCTCCAATATACCTCACAAAAGGGACATCTCTAGCAGCTTTGAGTATCATGTAAATCTAAGTAGGATAGGCTATCATTCACTAATATACAGTGGCGATCATGACATGAATATTACATTCTTGGCGACTCAAGCATGGGTAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCAATGGCATACAAATGGTCAAGTTGCAGGGGTGGAGGCCACACAGCTCCGGAGTACAAGCCTGAAGAATGCTTTGCCATGTACAGTAGGTGGATATCGAATAGGGCTTTGTAGGAACAGCCAAATAAGGTCATCTGCCAAGGAAGGAGTATAA 1386 0.43 MCFVARTCGAKLQNEIISFQLTTCGSIVQFLPGFQGPLPFLLETGYVGVGETEDVQTFYYFIESENDPKEDPLMLWLTGGPGCSALSGLAFEIGPLAFKYEEYNGSLPSLVLRPHSWTKVSSIIFVDLPVSTGFTYATTESAAQRSDWLLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPVIVQEISQGNDKGVQPWINLQGYLLGNALTTRREKNYQIPFAHGMGLISDELYESLQKNCKGEYVNVDTRNVLCSRDMNSYNEAISGLNKAHILEPSCQWLDSTQASWRRSLIKKYPSKYLNTHLKLPTLSCRSYVYFLCGYWANDDSVRKALHIRKGSIGKWRRCTSNIPHKRDISSSFEYHVNLSRIGYHSLIYSGDHDMNITFLATQAWVRSLNYSIVDDWRQWHTNGQVAGVEATQLRSTSLKNALPCTVGGYRIGLCRNSQIRSSAKEGV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00062 461 Pfam Serine carboxypeptidase 32 425 IPR001563 GO:0004185|GO:0006508
Sebi169g00062 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 417 IPR001563 GO:0004185|GO:0006508
Sebi169g00062 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Sebi169g00062 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Sebi169g00062 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Sebi169g00062 461 SUPERFAMILY alpha/beta-Hydrolases 28 422 IPR029058 -
Sebi169g00062 461 FunFam Serine carboxypeptidase-like 19 22 290 - -
Sebi169g00062 461 Gene3D - 321 435 - -
Sebi169g00062 461 Gene3D alpha/beta hydrolase 24 294 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00062 Sebi-Chr169 763300 767826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00062 24 51 Calmodulin-binding Proteins AT2G22960 71.429 5.69e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00062 K16296 - gmx:100792006 734.176