Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00061 ATGGGAAGGTTTAGTTCAAGTTATAGTAACTCTGATTCTGATTTCATTTATCGTGGGGTTCTACTTCCCCTTTTTTTACTGTCACAGATTTCCTTTCAACTCACAACGTGTGGCTCCATAGCGCAGTTCCTTCCTGGATTCCAGGGACCCCTTCCTTTTCTGCTTGAAACCGGGTATGTGGGAGTGGGTGAAACAGAGGATGTACAAACTTTCTATTACTTCATTGAGTCAGAGAACGATCCAAAGGAGGATCCTCTCATGCTTTGGCTAACCGGTGGACCTGGTTGCTCTGCCTTGTCTGGTCTTGTCTTTGAAATAGGTCCACTTGCATTCAAATACGAGGAATATAATGGGAGCCTCCCTAGTTTGTTGTTGAGGCCACACTCATGGACAAAGGTGAGTAGCATTATATTTGTAGATTTGCCAGTTTCCACGGGGTTTACTTATGCCACAACAGAGTCTGCTGCTCAACGAAGCGACTGGTTACTAGTTCACCAAGTCCATCAATTTCTTAGGAAGTGGCTAATTGATCATCCAAAATTTCTGTCCAATGAAGTTTACATTGGTGGTGATTCTTACTCTGGCATTCCTATTCCAGTAATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGGGTTCAGCCATGGATCAATCTCCAGGGATACCTGCTAGGGAATGCCTTAACAACTGGAAGGGAGAAAAACTATGCAATTCCCTTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATCAGTCACTGCAAAAGAATTGTAAAGGAGAGTATGTAAATGTAGACACCAGGAATGTATTGTGTTCAAGAGATATGAAATCATACAACGAGGCTACATCAGGACTTAATACGGCACATATTTTGGACCCTTTATGCGAGTGGCTTGATAATACTCAAGTTTCTCAGAGGAGATCTCTAATTAAGAAATATCCCTTCAAGTACCTCAATACTCATCTCAAATTGCCACCCTTAAGCTGTCGGAGTTATGCATATTTCCTTTGCGGTTATTGGGCCAATGATGATAGTGTTCGCAAAGCACTGAACATACCTAAGGGAAGTATTGGGAAGTGGCATCGTTGTAGCTTCAATATACCTCACAAAAGGGAAATCTCTAGCAGCTTTGAGTATCATGTAAATCTAAGTAGGAAAGGCTATCGCTCACTAATATACAGCGGCGATCATGACATGTCAATTCCATTCTTGGCGACTCAAGCATGGGTAAGATCTTTAAATTACTCCATTGTGGATGATTGGAGGCAATGGCATACAAATGGTCAAGTTGCAGGGGTGGAGGCCACACAGCTCCGGAGTACAAGCCTGAAGAATGCTTTGCCATGTACAGTAGGTGGATATCGAATAGGGCTTTGTAGGAACAGCCAAATAAGGTCATCTGCCAAGGAAGGAGTATAA 1425 0.4225 MGRFSSSYSNSDSDFIYRGVLLPLFLLSQISFQLTTCGSIAQFLPGFQGPLPFLLETGYVGVGETEDVQTFYYFIESENDPKEDPLMLWLTGGPGCSALSGLVFEIGPLAFKYEEYNGSLPSLLLRPHSWTKVSSIIFVDLPVSTGFTYATTESAAQRSDWLLVHQVHQFLRKWLIDHPKFLSNEVYIGGDSYSGIPIPVIVQEISQGNEKGVQPWINLQGYLLGNALTTGREKNYAIPFAHGMGLISDELYQSLQKNCKGEYVNVDTRNVLCSRDMKSYNEATSGLNTAHILDPLCEWLDNTQVSQRRSLIKKYPFKYLNTHLKLPPLSCRSYAYFLCGYWANDDSVRKALNIPKGSIGKWHRCSFNIPHKREISSSFEYHVNLSRKGYRSLIYSGDHDMSIPFLATQAWVRSLNYSIVDDWRQWHTNGQVAGVEATQLRSTSLKNALPCTVGGYRIGLCRNSQIRSSAKEGV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00061 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Sebi169g00061 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Sebi169g00061 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Sebi169g00061 474 Pfam Serine carboxypeptidase 45 438 IPR001563 GO:0004185|GO:0006508
Sebi169g00061 474 SUPERFAMILY alpha/beta-Hydrolases 43 435 IPR029058 -
Sebi169g00061 474 Gene3D alpha/beta hydrolase 51 447 IPR029058 -
Sebi169g00061 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 430 IPR001563 GO:0004185|GO:0006508
Sebi169g00061 474 FunFam Serine carboxypeptidase-like 19 35 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00061 Sebi-Chr169 753465 756767 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00061 37 64 Calmodulin-binding Proteins AT2G22960 67.857 2.90e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00061 K16296 - gmx:100792006 757.673