Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00060 ATGGCACACAACACTGAGGTGCCTCAGAAAGTTCCATTCTACAAGCTTTTCATTTTTGCTGATGGCCTTGACGTGACGTTGATGATCATTGGCACCATTTGTGCCATGGCAAATGGCTTATCGCAACCTCTCATGACCCTCATTCTTGGGAAGCTCATCAACGCCTTTGGCTCCAACGTTCCATCCCAAGTTGTTCATCAAGTTTCTAAGGTTGCACTATTATTTGTTTACTTGGGTGTTGGGTCTGGAATAGCATCATTTCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAAGCCACACGAATCCGTGGCTTGTACTTGAAAACTATATTAAAACAAGACATTGCTTTCTTTGACACTGAAACAACAACTGGAGAGGTAATTGGGAGAATGTCTGGTGACACTATTCTCATTCAAGATTCCATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGCTTCAACTTTTTTTGGTGGCTTTGTGATTGCCTTTGTAAAAGGATGGCAACTCGCTCTGGTTTTGCTTTCATGTATACCATTGGTTATCATTGCTGGTGGATTCATGTCTGTGTTGATGTCTAGAATGTCAAGTCGTGGGCAAGCTGCTTATGCAGAAGCAGGAAATGTTGTTGAACAAATAGTGGGAGCCATTAGAACAGTTGCATCTTTTACTGGAGAGAAAAAAGCAATAGAAAAGTATAATATAAAGTTGAAAGTTGCTTACACTACAATGGTTCAACAAGGGATGGTCTCGGGGCTAGGAATGGGAGTGCTTATGATGATTATCTTTTGCACCTATGGACTTGCCATGTGGTATGGTTCCAAACTAGTCATTGAAAAAGGATACATTGGTGGAACTGTCATAACTGTAATCGTAGCTCTTATGACTGGAGGAATGTCACTGGGTCAGGCATCCCCATGTGTAAATGCATTTGCTACAGGTCAAGCAGCAGCATATAAGATGTTTGAGACAATTAAAAGAAAGCCCAAAATTGATGCTTATGACACCAGTGGTGTTATCTTGGAAGACATAAAGGGAGATATTGAGCTCAAAGATGTTCACTTCACATACCCTGCAAGGCCAGATGTGCAGATATTCACTGGATTCTCATTATTTGTTCCAAATGGCACAACTACTGCTTTAGTGGGTCAAAGTGGAAGTGGGAAGTCTACAGTAATCAGTTTATTAGAAAGATTCTATGATCCTGATGCTGGAGAAGTCCTTATAGATGGAGTAAATTTGAAGAGTTTGCAAGTTAGATGGATAAGAGAACAGATTGGGTTGGTTAGTCAAGAACCTATCCTATTTACAACCAGTATAAAAGAGAACATAGCTTATGGGAAAGAAGGTGCAACTGATGAGGAGATAGCAACAGCAATAACACTTGCCAATGCCAAAAAGTTCATTGACAAGCTGCCTCAGGGCCTTGACACAATGGCAGGGCAGAACGGGACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGGGCAATATTGAAGAACCCAAAAATCCTCCTTCTTGATGAAGCAACTAGTGCTTTGGATGCTGAGTCAGAACGTATTGTTCAAGAAGCATTGGAAAGAGTTATGTCAAAAAGGACTACTGTAGTTGTTGCACATCGTTTGACAACCATTAGAAATGCTAATACCATAGCAGTGGTTCATCAGGGGAAGATTGTGGAAAAAGGAACTCATGATGAGTTAATCAAGGATGTTGATGATAGTCACATGACTAGATCAATAAGTAGAGGTTCATCAGGGAGTCGACACTCTCAGTCCCTTAGCTTTGCTCTTCCTTATCAAAGTGGTGGACAAACAGAAGAAGTGGATGTTGAACAAAGTCATGTTGATAATAAGAAGCCTAAAAGGGTTTCTATAAGACGTTTGGCATACCTGAATAAGCCTGAGGTTCTTGTCTTACTACTTGGATCCATTGCTGCAGCAATAAATGGTGTGGTGTTCCCTACATTTGGCCTCTTGTTTTCATCAGCCATTGCTATGTTCTTTAAACCTCCAGAACAACAGCAGAAAGATGCTAGGTTCTGGACACTTCTTTATGTGGGTTTAGGTTTAGTTACTCTAGTGGTTTTCCCACTCCAAAATTACTTCTTTGGGATTGCTGGTGGAAAACTAATAGAGAGAATTCGTTCCTTAACATTTGAGAAGGTTGTGCATCAAGAAATCAGTTGGTTTGATGACCCTGCAAATTCTAGTGGTGCAGTTGGTGCAAGGTTATCTACTGATGCTTCAACAGTGAAAAGTCTTGTTGGTGACACCTTGTCCCTCATGGTGCAAAACATATCAACAATCATAACAGGTCTAGTTATAGCATTCACTGCTAATTGGATTCTCGCTTTAATAATTCTGGCTGTGTCACCCATGGTCATTATGCAAGGATGTATTCAAATGAGGTTTCTTAAAGGATTCAGTGCTGATGCCAAGTATGAAGAGGCAAGTCAGGTGGCAACTGATGCTGTTGGTAGCATTAGAACTGTCGCATCATTTTGTGCAGAATCAAAGGTGATGGATATGTACAAGAAGAAATGTTCAAGGCCAGAAAAACAAGGTGTTCGGTTGGGGCTTGTTAGTGGTGCAGGACTTGGTTTCTCTTTTATGGCTCTATATTGCACAAATGCTTTTTGTTTCTACATAGGATCTGTTCTTGTGCGACACGGCCTTGCAACTTTTCCAGAGGTTTTCTTTTGCATAACAATTACAGCAATTGGTGTTTCCCAGACAAATGCCTTAGCACCAGACACTAACAAGGCCAGAGATTCCGCAACTTCAATATTTGAAATTCTTGACAGCAAACCTATCATTGACTCAAGCAGCAATGAAGGTAGAACACTAGAAACAGTTACTGGCAATATTGAACTTCATCATGTCAACTTTAATTACCCAACAAGGCCTCATATTCAAATTCTTAGAGATTTGAGCTTAAAAATCCCATCTGGAAAGACTGTTGCCTTGGTTGGAGAAAGTGGTTGTGGAAAATCAACAATCATCAGCCTTTTGGAGAGGTTTTATAATCCTAGCTCTGGGCATATACTACTAGATGGTGTGGATATTAGAGAGTTCAGATTAAGTTGGTTGAGGCAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATTCGTGCAAACATAGCTTATGGCAAAGAAGGAGGTGCTACAGAGGATGAGATAATTGCAGCAGCTCAAGCAGCCAATGCACACAGGTTCATAAGTTCTCTTCCAAATGGTTATGACACCACTGTTGGAGAAAGAGGTACACAACTATCAGGAGGGCAAAAGCAACGTATTGCCATTGCAAGAGCCATGCTAAAAGATCCTAAAGTCCTTTTACTTGATGAGGCAACTAGTGCACTTGATGCTGAGTCAGAGCGTGTAGTTCAAGAGGCTCTAGACAGAGTCAGTGTGGATAGAACTACTGTTGTGGTAGCTCACCGTCTTACAACAATTAGAGGGGCTGATATTATAGCAGTAATTAAAAATGGGGTGGTTGCTGAAAAGGGAAAGCATGATGTCTTGATCAAGATTACTGATGGGGCTTATGCTTCATTGGTTGCTTTATATTCTGGTGCAGCATAA 3618 0.4088 MAHNTEVPQKVPFYKLFIFADGLDVTLMIIGTICAMANGLSQPLMTLILGKLINAFGSNVPSQVVHQVSKVALLFVYLGVGSGIASFLQVSCWMVTGERQATRIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDSMGEKVGKFIQLASTFFGGFVIAFVKGWQLALVLLSCIPLVIIAGGFMSVLMSRMSSRGQAAYAEAGNVVEQIVGAIRTVASFTGEKKAIEKYNIKLKVAYTTMVQQGMVSGLGMGVLMMIIFCTYGLAMWYGSKLVIEKGYIGGTVITVIVALMTGGMSLGQASPCVNAFATGQAAAYKMFETIKRKPKIDAYDTSGVILEDIKGDIELKDVHFTYPARPDVQIFTGFSLFVPNGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKSLQVRWIREQIGLVSQEPILFTTSIKENIAYGKEGATDEEIATAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALERVMSKRTTVVVAHRLTTIRNANTIAVVHQGKIVEKGTHDELIKDVDDSHMTRSISRGSSGSRHSQSLSFALPYQSGGQTEEVDVEQSHVDNKKPKRVSIRRLAYLNKPEVLVLLLGSIAAAINGVVFPTFGLLFSSAIAMFFKPPEQQQKDARFWTLLYVGLGLVTLVVFPLQNYFFGIAGGKLIERIRSLTFEKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLSLMVQNISTIITGLVIAFTANWILALIILAVSPMVIMQGCIQMRFLKGFSADAKYEEASQVATDAVGSIRTVASFCAESKVMDMYKKKCSRPEKQGVRLGLVSGAGLGFSFMALYCTNAFCFYIGSVLVRHGLATFPEVFFCITITAIGVSQTNALAPDTNKARDSATSIFEILDSKPIIDSSSNEGRTLETVTGNIELHHVNFNYPTRPHIQILRDLSLKIPSGKTVALVGESGCGKSTIISLLERFYNPSSGHILLDGVDIREFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEDEIIAAAQAANAHRFISSLPNGYDTTVGERGTQLSGGQKQRIAIARAMLKDPKVLLLDEATSALDAESERVVQEALDRVSVDRTTVVVAHRLTTIRGADIIAVIKNGVVAEKGKHDVLIKITDGAYASLVALYSGAA 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00060 1205 MobiDBLite consensus disorder prediction 584 598 - -
Sebi169g00060 1205 MobiDBLite consensus disorder prediction 578 598 - -
Sebi169g00060 1205 SUPERFAMILY ABC transporter transmembrane region 25 334 IPR036640 GO:0005524|GO:0016020
Sebi169g00060 1205 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 962 1199 IPR003439 GO:0005524
Sebi169g00060 1205 CDD ABC_6TM_Pgp_ABCB1_D1_like 28 323 - -
Sebi169g00060 1205 ProSitePatterns ABC transporters family signature. 1102 1116 IPR017871 GO:0005524|GO:0016887
Sebi169g00060 1205 FunFam ABC transporter B family member 1 340 586 - -
Sebi169g00060 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 952 1199 IPR027417 -
Sebi169g00060 1205 CDD ABC_MTABC3_MDL1_MDL2 350 575 - -
Sebi169g00060 1205 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 646 930 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00060 1205 ProSitePatterns ABC transporters family signature. 489 503 IPR017871 GO:0005524|GO:0016887
Sebi169g00060 1205 FunFam ABC transporter B family member 1 625 928 - -
Sebi169g00060 1205 CDD ABC_6TM_Pgp_ABCB1_D2_like 635 945 - -
Sebi169g00060 1205 Gene3D - 952 1203 IPR027417 -
Sebi169g00060 1205 Pfam ABC transporter 980 1130 IPR003439 GO:0005524
Sebi169g00060 1205 FunFam ABC transporter B family member 9 15 345 - -
Sebi169g00060 1205 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 350 586 IPR003439 GO:0005524
Sebi169g00060 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 340 576 IPR027417 -
Sebi169g00060 1205 Gene3D - 340 624 IPR027417 -
Sebi169g00060 1205 PANTHER ABC TRANSPORTER B FAMILY 3 576 IPR039421 -
Sebi169g00060 1205 Pfam ABC transporter transmembrane region 28 299 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00060 1205 Pfam ABC transporter transmembrane region 646 913 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00060 1205 Pfam ABC transporter 371 517 IPR003439 GO:0005524
Sebi169g00060 1205 SMART AAA_5 989 1176 IPR003593 GO:0016887
Sebi169g00060 1205 SMART AAA_5 377 569 IPR003593 GO:0016887
Sebi169g00060 1205 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 29 315 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi169g00060 1205 Gene3D ABC transporter type 1, transmembrane domain 15 932 IPR036640 GO:0005524|GO:0016020
Sebi169g00060 1205 CDD ABC_MTABC3_MDL1_MDL2 962 1198 - -
Sebi169g00060 1205 FunFam ABC transporter B family member 1 952 1202 - -
Sebi169g00060 1205 SUPERFAMILY ABC transporter transmembrane region 626 943 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00060 Sebi-Chr169 732902 737892 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00060 6 1200 Calmodulin-binding Proteins AT2G36910 45.068 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00060 K05658 - gmx:100801771 1892.09