Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00053 ATGGCAATGAAAAACATCATTTCCTCAACATGTCTCATGCTCCTGTTTCTCCTTCTTCTTCCCTTAGCCTCATGCAACAAAATTAACAAACAGATTTATGTTGTTGAGTTTAGAGAAGAAAGTACTGGTGGAGATAAAACACTGCATGAAGTAGAGAATACCCATCACTCTTATTTGCTTTCAGTGAAGGAAAGTGAGGAAGAAGCCCAAGCTTCTCTTCTTTACAGTTACAAACACAGCATCAATGGCTTTGCAGCATTGCTTACTTCAAAAGAAGCCAATAAGCTCTCAGAAATGGAGGGAGTGGTCTCTGTTCATAAGAGTCGGCCAAAGATGTATTCTTTGCACACCACAAGGTCATGGAAGTTTGTGGGGTTAGATGGGCCTTTTAATCCTTGGGGACAAGAATCCAATCAGACAGATATTGGAGATGACTTGTTAACAAGAGCAAAATATGGGGAAAATATCATAGTAGGAATGATTGATAGTGATTCAAAGAGCTTCAGTGATGAAGGAATGGGGCCTGTTCCACAAAAATGGAAAGGAGTGTGCCATACTGGAACTGCTTTTGATTCATCTCAATGTAATAGAAAGATAATTGGTGCTAGGTACTACTTACATGGTTATGAAAGTGCATTTGGCCCTTTAAATGAAGATGAGGATTACAAATCAGCTCGTGACAAAGATGGACATGGATCTCACACAGCTTCCATAGTGGCAGGCCGTGCAGTTCCAAATGTCTCTGCCATTGGAGGCTTTGCCAGTGGCACTGCCTCAGGTGGAGCCCCCTTAGCCCGTCTTGCCATATACAAAGCATGTTGGCCATTTAAAGGAAAATCAAAACATGAAGGGAACATATGCACTGACATTGATCTCCTCAAAGCTATTGATGATGCTATTGGTGATGGGGTTGATGTGTTAAGTATTTCCATTGGGTTCAAAATGCCTATTCCTTATGAGGATGATGTGATTGCTAAGGGTGCATTACATGCTGTAAAGAAGAACATTGTGGTGGTTTGTAGTGCTGGAAACTCAGGTCCTTCACCTCAAAGTTTGTCAAACCCTGCACCTTGGATTCTCACTGTTGCTGCTAGTACTGTGGACCGTTCCTTTCTTGCTCCAATTAAGCTAAGCAATGGCACAACTATTGAGGGTCGATCAATTACTCCACTCCACATGGAAAATAGCTTCCACCCATTGGTTCTTGCTGGGGATGTTGAACTTCCAGGCGTGCTTAGTACAAATTCTGGGTATTGCCTAGACAATACCCTTCAACCTGACAAGGTACAGGGGAAGATAGTTCTCTGTATGAGAGGGCAAGGGGAGAGATTGAAAAAGGGGTTGGAAGTTCAAAGGGCTGGTGGAGTTGGTTTTATCCTTGGGAACAATAAAATGTTAGGAAATGATGTACCATGTGATCCTCATTTTATTCCAGCCACTGCAGTGTCCTATGAGAATGCCTTAAAACTTATTGAGTATGTCCATTCTTCCCCTAATCCAATGGCACAAATTTTGCCTGGAAGAACAGTGTTAAGAACCAAACCAGCACCCTCTATGGCCTCCTTCTCTAGTAGAGGTCCAAATATAATTGACCCTAATATTCTCAAGCCTGACATAACAGCTCCAGGAGTGGACATATTGGCAGCATGGACCGCTAAAGATGGGCCTACACGAATGACATTTCACGATAAACGAGTTGTTTCATACAATATCTTTTCTGGAACATCAATGTCTTGCCCTCATGTTGCTGCTGCAACAGTTCTTCTCAAAGCCATACACCCTACTTGGAGCACTGCTGCTATAAGATCTGCCCTCATCACTACAGCCAGGGCAACAGACAACACTGGCAATCCATTGACTGATGAAACAGGGAATCCTGCAACGCCCTTTGCAATGGGTTCTGGTCATTTCAACCCCAAAAAAGCATTAGATCCTGGACTTGTTTATGATGCCTCCTACATGGACTACCTTCATTACACTTGTAGCCTTGGAGTAACTCAAAAATTAAATATTACATATAAGTACTGTCCAAATCCAAAGTCATTTCCTGAACCGATTGATCTCAATTATCCTTCCATACAAGTCCATGGACTCAATTACACCAAGAGTATTGAGAGGACAGTGACCAATGTTGGTAGTAGGAGCAAAAGTGTTTACAAGTTTAATGCTAAGCCACCAAAGGAATACTCCATCACAGCCACTCCAAACATTTTGAAATTTAACCATGTTGGGCAGAAAATGAAGTTTTTCATCACAGTGACAGCAAACAGAGGACAGATACCAGCCAAGTATGATCCTTATAAGTACTATTTTGGATGGTATACTTGGACCGACCAACATCACGTTGCCAAAGGCCAATTAATTGGAGAGACAAGAATAGTTAGAAGCGATGGTGGTAGGATCGTGTGA 2409 0.4213 MAMKNIISSTCLMLLFLLLLPLASCNKINKQIYVVEFREESTGGDKTLHEVENTHHSYLLSVKESEEEAQASLLYSYKHSINGFAALLTSKEANKLSEMEGVVSVHKSRPKMYSLHTTRSWKFVGLDGPFNPWGQESNQTDIGDDLLTRAKYGENIIVGMIDSDSKSFSDEGMGPVPQKWKGVCHTGTAFDSSQCNRKIIGARYYLHGYESAFGPLNEDEDYKSARDKDGHGSHTASIVAGRAVPNVSAIGGFASGTASGGAPLARLAIYKACWPFKGKSKHEGNICTDIDLLKAIDDAIGDGVDVLSISIGFKMPIPYEDDVIAKGALHAVKKNIVVVCSAGNSGPSPQSLSNPAPWILTVAASTVDRSFLAPIKLSNGTTIEGRSITPLHMENSFHPLVLAGDVELPGVLSTNSGYCLDNTLQPDKVQGKIVLCMRGQGERLKKGLEVQRAGGVGFILGNNKMLGNDVPCDPHFIPATAVSYENALKLIEYVHSSPNPMAQILPGRTVLRTKPAPSMASFSSRGPNIIDPNILKPDITAPGVDILAAWTAKDGPTRMTFHDKRVVSYNIFSGTSMSCPHVAAATVLLKAIHPTWSTAAIRSALITTARATDNTGNPLTDETGNPATPFAMGSGHFNPKKALDPGLVYDASYMDYLHYTCSLGVTQKLNITYKYCPNPKSFPEPIDLNYPSIQVHGLNYTKSIERTVTNVGSRSKSVYKFNAKPPKEYSITATPNILKFNHVGQKMKFFITVTANRGQIPAKYDPYKYYFGWYTWTDQHHVAKGQLIGETRIVRSDGGRIV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00053 802 CDD Peptidases_S8_3 113 609 IPR034197 -
Sebi169g00053 802 CDD PA_subtilisin_like 375 504 - -
Sebi169g00053 802 Gene3D - 660 788 - -
Sebi169g00053 802 ProSiteProfiles Serine proteases, subtilase domain profile. 132 643 - -
Sebi169g00053 802 SUPERFAMILY Subtilisin-like 146 647 IPR036852 GO:0004252|GO:0006508
Sebi169g00053 802 Gene3D Peptidase S8/S53 domain 155 656 IPR036852 GO:0004252|GO:0006508
Sebi169g00053 802 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
Sebi169g00053 802 Pfam Subtilase family 207 634 IPR000209 GO:0006508|GO:0008236
Sebi169g00053 802 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Sebi169g00053 802 Pfam PA domain 418 490 IPR003137 -
Sebi169g00053 802 Pfam Fibronectin type-III domain 687 782 IPR041469 -
Sebi169g00053 802 FunFam subtilisin-like protease SBT1.5 368 511 - -
Sebi169g00053 802 SUPERFAMILY PA domain 385 497 IPR046450 -
Sebi169g00053 802 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Sebi169g00053 802 Gene3D - 368 511 - -
Sebi169g00053 802 FunFam Subtilisin-like protease SBT1.5 155 412 - -
Sebi169g00053 802 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 782 IPR045051 -
Sebi169g00053 802 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Sebi169g00053 802 PRINTS Subtilisin serine protease family (S8) signature 153 172 IPR015500 -
Sebi169g00053 802 PRINTS Subtilisin serine protease family (S8) signature 227 240 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00053 Sebi-Chr169 652862 658168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00053 23 784 Subtilisin-like Serine Gene Family AT5G45650 55.882 0.0 852