Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00050 ATGGAATCGAAAAACCCTGCAAGGTTTACGCTGGGGAAGCAGTCATCGCTGGCCCCGGAACGGCACAGTGAAGAACAAGAGCTTCACGACGATGGGGACGCTATTGATCCGGGAGTGAGGCTGATGTATTCGGCCAATGAAGGCGATGTGGATGGTATCCGTGAGGTGTTGGAGTTGGGTGTGAGTGTGAATTTCAGAGATATTGATGGCCGCACTGCTCTTCATGTTGCAGCGTGTCAGGGCTTGACTGATGTGGTTGCTTTGTTGCTCGAAAAAGGTGCTGAGATCGACCCTAAAGATCGATGGGGCAGCACGCCACTTGCAGATGCTATATTTTATAAAAACAATGATGTGATCAAACTATTGGAGAAGCATGGAGCAAGGCCTCTGATGGCCCCGATGCATGTTAAGCATGCACGTGAAGTCCCAGAATATGAAATCAATCCTAAAGAACTTGATTTTACCAACAGTGTGGAGATAACAAAGGGGACTTTCTGTAGCGCGTTATGGCGTGGGACAGAGGTTGCAGTAAAAAAGCTTGGGGAGGATGTGATTAGTGATGAGGAGAAAGTGAAGGCTTTCAGAGATGAGCTTGCTCTGTTCCAGAAGATCCGGCATCCAAATGTAGTCCAATTTCTGGGTGCTGTGACACAGAGTAGTCCAATGATGATTGTGACAGAATATCTTCCCAAGGGAGATCTTCGTGATTTCTTGAAAAGAAAAGGAGCTTTGAAACCAAGTACAGCTGTGAGATTTGCACTTGATATTGCTAGGGGAGTGGGTTATTTGCATGAAAATAAGCCATCACCCATTATTCACCGTGATCTTGAGCCTTCTAATATATTGCGGGATGATTCGGGGCACCTAAAAGTTGCAGACTTTGGGGTTAGCAAATTGCTGGCAGTTAAAGAAGACAGGCCTCTAACTTGCCAAGATACTTCTTGCCGCTATGTGGCTCCTGAGGTTTTCAAGCAAGAAGAATATGACACCAAAGTGGATGTGTTCTCATTTGCACTGATTCTGCAAGAGATGATTGAAGGCTGTCCTCCTTTTTCTGCAAAGAATGAAGATGAGGTTCCTAAAGTATATGCTGCAAAAGAGCGGCCGCCTTTCCGAGCTCCAGCCAAGCGTTATTCGCATGGACTTCGAGAATTGATTGAAGAGTGCTGGCATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTGGAGTCAATCTACAACACAATTGGTCAAAGAGGACGTTGGAAGGTTAGACCATTGAAATGCTTCCAGAATCTGGAAGCCTTACTGAAGAGGGATCGTTCAAGTGTAAGCAGTCGGGGCGGTTCATCTCGCTCCACATCCAGCCGTATATGA 1371 0.4617 MESKNPARFTLGKQSSLAPERHSEEQELHDDGDAIDPGVRLMYSANEGDVDGIREVLELGVSVNFRDIDGRTALHVAACQGLTDVVALLLEKGAEIDPKDRWGSTPLADAIFYKNNDVIKLLEKHGARPLMAPMHVKHAREVPEYEINPKELDFTNSVEITKGTFCSALWRGTEVAVKKLGEDVISDEEKVKAFRDELALFQKIRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLRDFLKRKGALKPSTAVRFALDIARGVGYLHENKPSPIIHRDLEPSNILRDDSGHLKVADFGVSKLLAVKEDRPLTCQDTSCRYVAPEVFKQEEYDTKVDVFSFALILQEMIEGCPPFSAKNEDEVPKVYAAKERPPFRAPAKRYSHGLRELIEECWHENPAKRPTFRQIITRLESIYNTIGQRGRWKVRPLKCFQNLEALLKRDRSSVSSRGGSSRSTSSRI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00050 456 PIRSF ILK 1 430 - -
Sebi169g00050 456 Gene3D - 7 144 IPR036770 -
Sebi169g00050 456 FunFam serine/threonine-protein kinase STY46-like 147 230 - -
Sebi169g00050 456 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 416 - -
Sebi169g00050 456 SUPERFAMILY Protein kinase-like (PK-like) 158 408 IPR011009 -
Sebi169g00050 456 SMART ANK_2a 102 131 IPR002110 GO:0005515
Sebi169g00050 456 SMART ANK_2a 69 98 IPR002110 GO:0005515
Sebi169g00050 456 Pfam Protein tyrosine and serine/threonine kinase 170 407 IPR001245 GO:0004672|GO:0006468
Sebi169g00050 456 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Sebi169g00050 456 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Sebi169g00050 456 ProSiteProfiles Protein kinase domain profile. 119 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi169g00050 456 FunFam Os01g0748600 protein 140 427 - -
Sebi169g00050 456 Gene3D Transferase(Phosphotransferase) domain 1 230 442 - -
Sebi169g00050 456 CDD STKc_MAP3K-like 160 407 - -
Sebi169g00050 456 MobiDBLite consensus disorder prediction 18 35 - -
Sebi169g00050 456 PRINTS Tyrosine kinase catalytic domain signature 226 239 IPR001245 GO:0004672|GO:0006468
Sebi169g00050 456 PRINTS Tyrosine kinase catalytic domain signature 378 400 IPR001245 GO:0004672|GO:0006468
Sebi169g00050 456 PRINTS Tyrosine kinase catalytic domain signature 265 283 IPR001245 GO:0004672|GO:0006468
Sebi169g00050 456 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Sebi169g00050 456 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Sebi169g00050 456 FunFam Integrin-linked protein kinase family 19 145 - -
Sebi169g00050 456 SUPERFAMILY Ankyrin repeat 40 131 IPR036770 -
Sebi169g00050 456 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00050 Sebi-Chr169 560569 568077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00050 2 428 MAP Kinase Kinase Kinase AT4G18950 69.053 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Sebi169g00050 PK_Tyr_Ser-Thr 7.9e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00050 - - gmx:100790126 819.305