Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00043 ATGGCATCAAGCAGCAAAGGCAAAGCCATAGGCATTGACCTTGGCACAACCTACAGCTGCGTTGCAGTGTGGCAACACAATCATGTTGAGGTCATTCCAAATGAGCAAGGAAACCGCACCACTCCTTCCTTCGTTGCCTTCACTGATACCCAAAGGTTAACCGCCGAAGCTGCCATGAACCAAGTTGCCACCAATCCACACAACACCATTTTCGACGCCAAACGCGAAGAGAAGCATCTTGCTGCTGAAGAGATATCTTCGATGGTGCTGTCCAAGATGAAGGAGGTAGCTGAAGCTTATCTGGGTCATGCAGTGAAGCAAGCGGTGATCACTGTCCCTGCTTACTTCAACAACTCACAGAGACAGGCCACTAAGGATGCAGGGGAAATTGCTGGTTTCAATGTCATGAGGATCATCAACGAGCCAACTGCAGCTGCTATTGCTTACGGTTTGGACAAGAAGGGGTGGAGAGAGGGTGAGCAGAACGTGCTTGTGTTTGATCTTGGTGGTGGCACTTTTGATGTTTCCTTGGTGACCATCGATGAAGGAATGTTTAAGGTTAAGGCCACAGTGGGAGATACCCATTTGGGTGGTGTGGACTTTGATAACAAATTGGTGAACTATCTTGTGGATGTGTTTAAGAGAAAGTACAAGATGGACGTTAGTGAGAATCCCAAAGCTCTAGGGAGGTTAAGATCAGCTTGTGAAAAAGCTAAGAGGATACTATCTTCAATTAACCAGGCCACTATTGAGGTTGACAATTTATGTGGAGGGATTGATCTACATGTCCCTGTTCCAAGGGCTTTGTTTGAGGAATTGAACAAGGACTTGTTCATAAAGTGCATGGAGACTGTGGAGAAATGCCTTGTTGAGGCAAAGATTAATAAAAGACAAGTCCATGAGCTTGTTCTTGTAGGTGGGTCTACTAGAATTCCAAAGGTTCAGCAACTTTTGAAGGACATGTTCAGTTTCAATGGCAAAGCCAGAGAGCTTTGTAAAAGCATTAACCCTGATGAAGCTGTGGCATATGGTGCAGCTGTTCAAGCAGCGATCTTGAGTAATGAAGAAGACAAGAAAGTGGAGGACTTGCTGTTGCTGGATGTTATGCCTCTTAGTCTTGGGATTGAGACTGATGGGGGTCTCATGTCTGTGATGATTCCAAAGAATACCATGATCCCCACCAAGAAGGAGAGAGTTTTCTCTACTTCTTCCGAAAGTGTTTTGATCAAAGTGTATGAGGGAGAACGAGCTAAGACAGTGGATAACTTCTTTCTTGGGATGTTTGAGCTCTCGGGGTTCAATCCTGCACGAAGAGGAATCTCACAGATCAATGTTTGTTTTGATGTAAATGTTGATGGCATTGTGGAGGTGACTGCTGAAGATAGGACAACGACGCTGAAAAAGAAGATCACGATCACCAACACGCAGGGAAGGCTGAGCCCTGAAGAGATAAGGAGGATGGTGAGAGATGCAGAGAGATACAAGGCAGATGATGAGGAAATGAAGAAGAAGGTGAAGGCCAAGAACTTGCTTGAGAATTATGCTTATGAGATGAGGGCAAGAATGAAGAATTTTGAAAAGGCAGTGGAAGAGACCATAGAATGGCTTGAAAGAAACCAATTGGCAGAAGTTGATGAGTTTGAGTTCAAGAAGCAGGAATTGGAAAGGGATATGCATTCGCTGTCATTGTAA 1692 0.448 MASSSKGKAIGIDLGTTYSCVAVWQHNHVEVIPNEQGNRTTPSFVAFTDTQRLTAEAAMNQVATNPHNTIFDAKREEKHLAAEEISSMVLSKMKEVAEAYLGHAVKQAVITVPAYFNNSQRQATKDAGEIAGFNVMRIINEPTAAAIAYGLDKKGWREGEQNVLVFDLGGGTFDVSLVTIDEGMFKVKATVGDTHLGGVDFDNKLVNYLVDVFKRKYKMDVSENPKALGRLRSACEKAKRILSSINQATIEVDNLCGGIDLHVPVPRALFEELNKDLFIKCMETVEKCLVEAKINKRQVHELVLVGGSTRIPKVQQLLKDMFSFNGKARELCKSINPDEAVAYGAAVQAAILSNEEDKKVEDLLLLDVMPLSLGIETDGGLMSVMIPKNTMIPTKKERVFSTSSESVLIKVYEGERAKTVDNFFLGMFELSGFNPARRGISQINVCFDVNVDGIVEVTAEDRTTTLKKKITITNTQGRLSPEEIRRMVRDAERYKADDEEMKKKVKAKNLLENYAYEMRARMKNFEKAVEETIEWLERNQLAEVDEFEFKKQELERDMHSLSL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00043 563 PANTHER HEAT SHOCK PROTEIN 70KDA 9 530 IPR013126 GO:0005524|GO:0140662
Sebi169g00043 563 FunFam Heat shock 70 kDa protein 355 508 - -
Sebi169g00043 563 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 507 558 IPR029048 -
Sebi169g00043 563 Gene3D - 162 327 - -
Sebi169g00043 563 SUPERFAMILY Actin-like ATPase domain 8 153 IPR043129 -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 108 128 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 36 48 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 335 355 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 171 181 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 8 21 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 362 381 - -
Sebi169g00043 563 PRINTS 70kDa heat shock protein signature 440 456 - -
Sebi169g00043 563 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 359 512 IPR029047 -
Sebi169g00043 563 Coils Coil 537 557 - -
Sebi169g00043 563 ProSitePatterns Heat shock hsp70 proteins family signature 2. 165 178 IPR018181 -
Sebi169g00043 563 Gene3D - 79 161 - -
Sebi169g00043 563 FunFam Heat shock 70 kDa 197 280 - -
Sebi169g00043 563 Gene3D Actin; Chain A, domain 4 200 279 - -
Sebi169g00043 563 SUPERFAMILY Actin-like ATPase domain 160 352 IPR043129 -
Sebi169g00043 563 Gene3D - 1 78 - -
Sebi169g00043 563 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 357 507 IPR029047 -
Sebi169g00043 563 ProSitePatterns Heat shock hsp70 proteins family signature 3. 302 316 IPR018181 -
Sebi169g00043 563 Gene3D - 508 561 IPR029048 -
Sebi169g00043 563 FunFam heat shock 70 kDa protein-like 3 163 - -
Sebi169g00043 563 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sebi169g00043 563 Pfam Hsp70 protein 77 559 IPR013126 GO:0005524|GO:0140662
Sebi169g00043 563 Pfam Hsp70 protein 9 75 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00043 Sebi-Chr169 453507 455251 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00043 1 555 Calmodulin-binding Proteins AT3G12580 64.098 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00043 K03283 - gmx:100788531 852.432