Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00037 ATGGCGGATAAGTCAGCAAGCAATGGAAACCACGAGGTCGTTTTGAGTGTAAACGACAATGCCTCCAAAAAGTGCGACGACTCAGGCATCGAAGACTGCGTGCCTTTTTTGCAGAAGTTGGTAGCAGAGGTGGTGGGCACGTACTTGTTGATATTTACAGGTTGTGCTTCGGTGGTGGTGAATCTTAACAATGAAAAGGTGGTGACACTTCCTGGGATTTCAATTGTTTGGGGACTCACTGTTATGGTACTGGCTTACTCTCTTGGTCACATCTCTGGTGCCCATTTCAACCCAGCTGTCACCATTGCTCATGCTTCCACCAAAAGGTTTCCCTTCAAACAGGTACCAGCTTATATAGTAGCTCAGGTCTTAGGATCCACACTCGCAAGTGGAACTCTTAGACTCATATTCAGTGGCAAGGAAAACCATTTTGCAGGAACACTCCCGGCTGGTTCTGACCTGCAAGCTTTTGTGGTTGAATTCATAATCACTTTCTACCTCATGTTCGTCGTTTCTGGAGTAGCCACCGATAACAGAGCGATTGGTGAATTGGCTGGGCTTGCAGTTGGGTCTACGGTGCTGCTAAATGTGTTGTTTGCCGGGCCAATCACTGGAGCATCAATGAACCCAGCAAGAAGCATAGGCCCTGCAATTGTGCACCATGAGTACAGAGGAATATGGATATACATAGTGTCACCCATTTTGGGAGCTTTGGCAGGTACATGGGCCTACAGTTTCATAAGGTACACCAACAAGCCAGTTCGTGAGCTCACCAAGAGTGCATCTTTCCTCAAAGGAAAGGGATGTGAATGA 813 0.4723 MADKSASNGNHEVVLSVNDNASKKCDDSGIEDCVPFLQKLVAEVVGTYLLIFTGCASVVVNLNNEKVVTLPGISIVWGLTVMVLAYSLGHISGAHFNPAVTIAHASTKRFPFKQVPAYIVAQVLGSTLASGTLRLIFSGKENHFAGTLPAGSDLQAFVVEFIITFYLMFVVSGVATDNRAIGELAGLAVGSTVLLNVLFAGPITGASMNPARSIGPAIVHHEYRGIWIYIVSPILGALAGTWAYSFIRYTNKPVRELTKSASFLKGKGCE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00037 270 PANTHER AQUAPORIN NIP2-1 23 263 IPR034294 -
Sebi169g00037 270 Pfam Major intrinsic protein 34 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 Gene3D Glycerol uptake facilitator protein. 3 259 IPR023271 -
Sebi169g00037 270 SUPERFAMILY Aquaporin-like 35 258 IPR023271 -
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 CDD MIP 38 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00037 270 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Sebi169g00037 270 NCBIfam MIP family channel protein 42 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00037 Sebi-Chr169 402329 403716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00037 3 265 Major Intrinsic Protein MIP AT5G37820 55.882 8.63e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00037 K09874 - gmx:100812577 467.233