Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00036 ATGGCTGATAATTCACCAAGCAATGGAAACCACCAAGTGGTTTTAAATGTAAACTGTGATGACGACTCAGGAATTGAAGACTGTGTGCCTCTTTTACAGAAGTTGGTAGCAGAGGTGGTGGGCACATACTTCTTGATATTTGCGGGGGGTGCTTCAGTGGTGGTGAACCTTGGCAATGACAAGGTGGTTACACTTCCCGGGATTTCAATTGTTTGGGGACTCGCTGTTATGGTATTGGCTTACTCTCTTGGTCACATCTCTGGTGCTCATTTCAACCCAGCAGTCACCATTGCTCATGCTTCCACCAGAAGGTTTCCCTTCAAACAGGTACCAGCTTATATAATAGCTCAGGTCCTTGGATCCACACTTGCAAGTGGAACTCTTAGACTTATATTCAATGGCAAGGAGAACCATTTTTCAGGAACACTCCCGGCTGGTTCTGACCTACAAGCTTTTGTGGTTGAATTCATAATCACTTTCTACCTCATGTTTGTCATTTCTGGAGTAGCCACAGATAACAGAGCGATTGGTGAGTTGGCTGGGCTTGCAGTTGGGTCTACGGTGCTGCTAAATGTGATGTTTGCCGGGCCAATAACTGGAGCATCAATGAACCCAGCAAGAAGCTTAGGGCCTGCTATTGTGCACCATGAGTACAGAGGAATATGGATATATTTGGTGTCACCAATTTTGGGTGCAGTGGCAGGTACATGGGTGTACAATTTCATCAGATACACGAATAAGCCAGTGCGTGAGATCACCAAGAGTGCCTCTTTCCTCAAAGGAGCAGGACAAGGTCGAGCTGATTGA 807 0.461 MADNSPSNGNHQVVLNVNCDDDSGIEDCVPLLQKLVAEVVGTYFLIFAGGASVVVNLGNDKVVTLPGISIVWGLAVMVLAYSLGHISGAHFNPAVTIAHASTRRFPFKQVPAYIIAQVLGSTLASGTLRLIFNGKENHFSGTLPAGSDLQAFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVHHEYRGIWIYLVSPILGAVAGTWVYNFIRYTNKPVREITKSASFLKGAGQGRAD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00036 268 Pfam Major intrinsic protein 30 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 33 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 154 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 109 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PRINTS Major intrinsic protein family signature 72 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 CDD MIP 33 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 PANTHER AQUAPORIN NIP2-1 26 259 IPR034294 -
Sebi169g00036 268 Gene3D Glycerol uptake facilitator protein. 19 255 IPR023271 -
Sebi169g00036 268 SUPERFAMILY Aquaporin-like 30 253 IPR023271 -
Sebi169g00036 268 NCBIfam MIP family channel protein 37 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi169g00036 268 ProSitePatterns MIP family signature. 90 98 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00036 Sebi-Chr169 395356 396968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00036 18 264 Major Intrinsic Protein MIP AT5G37820 60.784 1.45e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00036 K09874 - gmx:100812577 461.455