Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00017 ATGAAGAACTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCAGCAGTGAATATTCTCCTCAAGAAAGTCCTTGAGGAAGGAATGAACCATTTGGTTTTTATCACATACCGTCTCTCAATTGCTACCATTTTCGTAGCCCCAATCGGTTACTTTTGGGAAAGAAATGGCAGACCTCGGCTAACATTTCGAATTTTATGTTACCTCTTCTTCAGTGCCATTGTTGGGGCATCAGTCACTCAATACTTTTTCCTTCTGGGGATCCAATATACGTCTGCTACATTTGCTTGTGCTTTTGTCAACATGGTGCCTGTGGTCACGTTCATCATGGCTTTGCCATTTGGGTTAGAGACTGTGAACATCAAGTGCAACAGTGGGAGTGCGAAGATTCTTGGTACATTGGTGTGCGTAGGCGGCGCATTGTTGTTGACACTTTACAAAGGAAAGGCACTGTTTCATTTTTCTCATTCTTCTGTAACAACGAGTCCTGCAGTGAAGTTAGCTGCTGCTTCTACAAGGACAACAGAGAAATGGACTGTTGGTGTGATAGCTTTGATTTTGGGGACCCTGTTTTGGTCTTCTTGGTTCATTTTACAATCAAATATAAGCAAGAGATACCCATGCCAGTATTCTAGCACAGCCATCATGAGTTTCTTTGGAGCCATTCAATCAGCTGTCATTTGCTTTCTCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATAATTGCCATTCTGTATGCTGGAATGATTGGATCGGGTTTGTGTTTTGTGGGTATGTCATGGTGTGTCAAGAAGAGGGGTCCAGTGTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCTATGGTTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAGTGTGATGGGATCCATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAGCAAGGAGATGAAGAATCGTTTGATTAAGTTAGTTCAAGAAGCTGAAGAAACCCCGGAACAAGAGCCCCAACCACAAATACAACACTTGACAGTGTCTTGTGATTCGCGGTGTCACTAA 1101 0.4214 MKNCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFVAPIGYFWERNGRPRLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVVTFIMALPFGLETVNIKCNSGSAKILGTLVCVGGALLLTLYKGKALFHFSHSSVTTSPAVKLAAASTRTTEKWTVGVIALILGTLFWSSWFILQSNISKRYPCQYSSTAIMSFFGAIQSAVICFLTDHNLSIWVLKGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMVDIPVLHEQLYLGSVMGSILVMIGLYILLWGKSKEMKNRLIKLVQEAEETPEQEPQPQIQHLTVSCDSRCH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00017 366 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Sebi169g00017 366 Pfam EamA-like transporter family 11 150 IPR000620 GO:0016020
Sebi169g00017 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Sebi169g00017 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
Sebi169g00017 366 PANTHER WAT1-RELATED PROTEIN 8 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00017 Sebi-Chr169 179795 182246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00017 7 258 Nodulin-like Gene Family AT3G30340 50.000 6.55e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00017 - - gmx:100803670 628.632