Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00005 ATGAAGAACACCGTGGTGGAGAGGTTCTCTGATTTCTACGAGAAGTGGATTTGGAAGGTGGAGGAGATCCTGCATCAGCTTCTGGAGGTGTCAAAGCAGAGAAAGGAGGTGGTCAAAACTGAACAAGAGCTGCAAGCACTGGTCTCCAAAGCCACAACCCACATCAAGGAATACTACACTGTCAAATGGGGTGCTGCTCATGAAGACGTTCTCGTCTTCTTCTCACCAACCTGGGTCACTCCTCTGGAGAATGCTTACATGTGGATGACTGGTTGGAAGCCTTCCTTGGTGTTCCGCCTCCTCAAGAAGGGTCCAACCATGACAGAGGAGCAGCAGAAGAAGGTAGAGGAGCTGAGAAAGAGGATCAGGATGGAGGAGGATAAGGTGGAGAGGGACATGGAGAGGCAGCAAGTGGCCATGGCTAACCCAAACATAGTGGACCTGGCAAAGCAGTCTGGCAGATCAATGAAGCAGGTGGGTGAGGGTGATGCTGATGCTGATGCTGCAACAGGGGTTGATGGGTTGGTGGATGTGGCCTTGAAGGGTGTCTTTGCAGGCTTGGAGAGGGTTATGAAGGCTTCTGATTGTGTCAGACTTAAGGCACTCAAGGGGGTTTTGGATGTGCTTGGTCCAATGCAGTCTGTGGAATTCTTGGTTGCATTTATAGCTATGAGGCTACGCCTGAGGCAATGGGGTAAGAAGAGAGACATGGCTGCTGGATCCATACTCAATCAGGAGGACAAGTGA 747 0.5087 MKNTVVERFSDFYEKWIWKVEEILHQLLEVSKQRKEVVKTEQELQALVSKATTHIKEYYTVKWGAAHEDVLVFFSPTWVTPLENAYMWMTGWKPSLVFRLLKKGPTMTEEQQKKVEELRKRIRMEEDKVERDMERQQVAMANPNIVDLAKQSGRSMKQVGEGDADADAATGVDGLVDVALKGVFAGLERVMKASDCVRLKALKGVLDVLGPMQSVEFLVAFIAMRLRLRQWGKKRDMAAGSILNQEDK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00005 248 Coils Coil 108 135 - -
Sebi169g00005 248 Pfam Seed dormancy control 27 102 IPR025422 GO:0006351|GO:0043565
Sebi169g00005 248 Coils Coil 30 50 - -
Sebi169g00005 248 ProSiteProfiles DOG1 domain profile. 6 238 IPR025422 GO:0006351|GO:0043565
Sebi169g00005 248 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00005 Sebi-Chr169 29273 30019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00005 43 229 bZIP Transcription Factor Family AT3G12250 27.128 1.45e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00005 - - gmx:100808459 335.88