Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi169g00001 ATGTCAGAAGGATATGAGGAAACTTCATCGGGATCTTCCCAGAAATGTTCTTCATTTGACTTGAATGAAGAAGCTAGCTGCAGTGAAGATAACAACAACAATAATAAGGATGAGGCATGTGAACTCAGACATGAAGAGAATATTGAGAAAGCAAATATTGATGATGAGGGAAGTTCAGCAGCAAATAGAAGCAGCAGCAGCACATCAAATTCAAGAGGAACAGTTAGACAATATGTTAGATCCAAGATGCCTCGCCTTCGGTGGACTCCTGACCTTCATCTCTCATTTGTGCATGCTGTTGAAAGGCTTGGAGGTCAAGAGAGAGCAACACCCAAGATGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTCGACGACCGCGGCCAAGTACTAAGCCAAGAAGTAGGCCGTAGATCTCAGATACTCCATCATCAATCCATGAGTCCTCATCAACATTTTAAGATGGGAAATGGTGGAATTATTCTAGCAA 538 0.4257 MSEGYEETSSGSSQKCSSFDLNEEASCSEDNNNNNKDEACELRHEENIEKANIDDEGSSAANRSSSSTSNSRGTVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKMVLQLMNVRGLSIAHVKSHLQMYRSKKLDDRGQVLSQEVGRRSQILHHQSMSPHQHFKMGNGGIILA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi169g00001 179 MobiDBLite consensus disorder prediction 30 53 - -
Sebi169g00001 179 Gene3D - 83 140 - -
Sebi169g00001 179 MobiDBLite consensus disorder prediction 57 76 - -
Sebi169g00001 179 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 63 153 IPR046955 GO:0003700
Sebi169g00001 179 FunFam Myb family transcription factor 82 140 - -
Sebi169g00001 179 MobiDBLite consensus disorder prediction 1 29 - -
Sebi169g00001 179 NCBIfam myb-like DNA-binding domain, SHAQKYF class 84 139 IPR006447 GO:0003677
Sebi169g00001 179 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
Sebi169g00001 179 MobiDBLite consensus disorder prediction 1 76 - -
Sebi169g00001 179 Pfam Myb-like DNA-binding domain 86 136 IPR001005 -
Sebi169g00001 179 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 140 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi169g00001 Sebi-Chr169 25 2017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi169g00001 41 141 G2-like Transcription Factor Family AT2G42660 60.396 2.37e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi169g00001 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi169g00001 - - vun:114187451 223.402