Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi168g00092 ATGAACTCTTTTCGTGCGGTAGCCACAGCTGTGTGCTGTGTAGTGGTTGTGCTTGGAGGGTTACCTTTCTCCTCAGATGCACAATTAGATCCCTCATTTTATAAGAAAACATGTCCACAGCTGCATTCTATTGTTCATAAACTCGTATGGAAAGCTTCATTATCTGATCCCCGAATCTTTGCCAGTCTCGTCAGGCTTCACTTTCATGATTGTTTTGTTCTAGGCTGTGATGCATCGATTTTGTTGAACAACACCGCTACCATTGTGAGTGAACAACAAGCTTTGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAATAATATCAAGACAGCAGTGGAAAAAGCTTGCCCTGGCATAGTTTCCTGTGCTGATATTCTTGCCCTGGCTGCTGAAGCATCTTCTGCTCTGGCTTTCGGTCCTTGTTGGAAAGTTCCTTTGGGAAGAAGGGATGGTTTAACAGCCAACAGGACCCTTGCTAATATAAATCTTCCAGCTCCTTTCTTCACTCTTGATCAACTTAAAAAAGCTTTTTCGGATCAAGGCCTTGACACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGGGCTCACTGCTCTTTATTCCAAGATCGATTGTACAACTTCAACAACACTGGCAAACCCGATCCAACTCTTGATACAACTTACTTACAAACATTAAGCAAAATCTGCCCCAATGGTGGACCTGGCACTAATCTCGCCAATTTTGACCCAACCACTCCTGATAAACTTGATAAGAACTACTACTCCAATCTTAAAGTTAAAAAGGGCTTGCTTCAAAGTGACCAAGAGTTGTTCTCAACACCCGGTGCAGATACCATTAGCATTGTCAACAAGTTCGCTAGTAGTCAAGATGCTTTCTTTGAGAGCTTTAAGGCTTCCATGATTAAAATGGGTAATATTGGTGTCCTAACGGGGAAGAAAGGAGAAATTCGAAAACAGTTTATTGGGGCTCAGAATTTCAAAATGACGTGTAGCGTCCTCAGGAAGATGAATCGGGTTCTCGGTGTTGGTCATCCTCTACTCGTTCGCTCTGTATCGAACTCTAAGCTTTCGTTATTACCATCCATTTTCCAATTCCAAGCCTATTCATCCGCACGAAGACGGTTAATAGCTGATCTTGCTGAAGCTGAAGGTCATCATCCTGATCTTCACCTTGTTGGCTGGAATAATGTTACTATCGAGATTTGGACTCATTCTGTTGCCCCAATACCTAAAGGGTTAAAGACCACTAGACCAGAAAGAGAAGTACTTCAAGGTTCTGATTTCACTATTTTTCTTCTCTGCTATGCCACATTAATCCCTCCAGAAGGCCCCACCACTATGTCAACATCACTTTGTGGTATTGTGGTTCTGCAAGGAAAAATGAATGCAGAATAG 1413 0.4239 MNSFRAVATAVCCVVVVLGGLPFSSDAQLDPSFYKKTCPQLHSIVHKLVWKASLSDPRIFASLVRLHFHDCFVLGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNNIKTAVEKACPGIVSCADILALAAEASSALAFGPCWKVPLGRRDGLTANRTLANINLPAPFFTLDQLKKAFSDQGLDTTDLVALSGAHTFGRAHCSLFQDRLYNFNNTGKPDPTLDTTYLQTLSKICPNGGPGTNLANFDPTTPDKLDKNYYSNLKVKKGLLQSDQELFSTPGADTISIVNKFASSQDAFFESFKASMIKMGNIGVLTGKKGEIRKQFIGAQNFKMTCSVLRKMNRVLGVGHPLLVRSVSNSKLSLLPSIFQFQAYSSARRRLIADLAEAEGHHPDLHLVGWNNVTIEIWTHSVAPIPKGLKTTRPEREVLQGSDFTIFLLCYATLIPPEGPTTMSTSLCGIVVLQGKMNAE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi168g00092 470 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PANTHER PEROXIDASE 72-RELATED 26 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 Gene3D - 33 325 - -
Sebi168g00092 470 SUPERFAMILY PCD-like 366 415 IPR036428 GO:0006729|GO:0008124
Sebi168g00092 470 Gene3D Transcriptional coactivator/pterin dehydratase 361 435 IPR036428 GO:0006729|GO:0008124
Sebi168g00092 470 CDD secretory_peroxidase 28 325 IPR033905 GO:0004601|GO:0042744
Sebi168g00092 470 FunFam Peroxidase 32 176 - -
Sebi168g00092 470 ProSiteProfiles Plant heme peroxidase family profile. 28 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 FunFam Peroxidase 166 309 - -
Sebi168g00092 470 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 Pfam Peroxidase 49 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi168g00092 470 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Sebi168g00092 470 Gene3D Peroxidase, domain 2 166 309 - -
Sebi168g00092 470 Pfam Pterin 4 alpha carbinolamine dehydratase 380 413 IPR001533 GO:0006729|GO:0008124
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi168g00092 Sebi-Chr168 1366395 1370064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi168g00092 11 323 Peroxidase AT5G06720 56.869 3.71e-127 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi168g00092 K00430 - gmx:112997600 507.679