Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi168g00086 ATGGCACTTTCTATGCACAAGGACTCGTCCAACAATCAGATGGATTCTAGCAAGTATGTGAGGTATACACCTGAACAAGTAGAGGCTTTGGAGAGGGTCTATGCAGAATGTCCAAAACCCAGTTCTTTGAGAAGGCAGCAGCTTATCAGGGAGTGCCCCATCCTCTCTAACATTGAACCCAAACAAATCAAAGTTTGGTTTCAAAATCGCAGATGTCGAGAGAAGCAGAGAAAGGAAGCTTCTCGTCTGCAGACAGTGAATAGAAAGCTGACTGCAATGAACAAACTGTTAATGGAAGAGAATGACCGTTTGCAGAAGCAGGTCTCACATCTGGTTTATGAAAATGGATACATGAAGAACCAGATACAGACTGCTTCTGCTGCTACCACCACAGACAATAGCTGTGAGTCTGTGGTAATGAGTGGTCAAAACCAACAGCAAAACCCAACTCAGCATCCCCAGAGGGATGCCAACAACCCAGCTGGTCTTCTCGCCATTGCTGAGGAGACCCTGGCAGAGTTCCTTTCCAAGGCTACTGGAACTGCTGTCGACTGGGTCCAGATGATTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTGTTTCCCGCAACTGCAGTGGGGTAGCAGCACGAGCCTGCGGCCTTGTGAGTCTAGAGCCCACAAAGGTTGCCGAGATTCTTAAAGATAGAACATCGTGGTATCGTGACTGTCGATGCCTTGATGTCTTGAGTATAGTCCCCACTGGAAATGGGGGCACAATAGAGCTCATGTACATGCAGACATATGCGCCTACAACATTGGCAGCAGCAAGGGACTTTTGGACACTAAGATACACTACTAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCTTTGACTTCTTCAACTGGTGGTCCCACAGGGCCTCCTCCTTCAAACTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTATCTAATTAGACCTTGTGAGGGTGGTGGATCCATTATTCATATTGTTGATCATATTGATTTAGATGTCTGGAGTGTCCCTGAAGTATTGAGGCCCCTCTATGAATCATCAAAAATCTTGGCTCAGAAATTGACTATTGCTGCCTTGCAACATATAAGACAAATAGCACAAGAATCAAGTGGAGAAATTCAGTATGGTGGGGGACGCCAACCTGCTGTCTTGAGGACATTTAGTCAGAGGCTTTGCAGGGGATTTAATGATGCCGTGAATGGGTTTGTGGATGATGGTTGGTCACTGATGGGTAATGATGGAGTGGAAGATGTGACAATAGCCATAAACTCATCTCCTAACAAGTTTTTGGGGTCCAATTACAATTCGTCAATGTTCCCAGCATTTGGAGGTGGGGTCCTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTGCTTGTTCGATTTCTGAGGGAGCATCGGTCAGAGTGGGCGGATTATGGGGTTGATGCCTACTCTGCTGCATCTCTTAAGGCTAGTCCCTATGCAGTTCCTTGTGCAAGGCCTGGTGGTTTCCCCAGCAGCCAGGTCATTTTACCCCTTGCCCATACTATTGAGCATGAGGAGTTCCTGGAGGTAGTTCGTATAGAGGGCCATGCTTTTTCCCCTGAAGACGTGGCATTGGCACGTGATATGTATCTATTGCAGCTGTGCAGTGGAGTTGATGAAAATGCAATTGGGGCATGTGCTCAACTTGTGTTTGCACCTATTGATGAATCATTTGCGGATGATGCTCTTCTACTACCTTCTGGTTTTCGTGTCATTCCTTTGGATCCTAAATCAGATGGTCCAGCAGCAACAAGGACATTGGATTTGGCATCCACCCTTGAAGTGGGATCTGGGAATGCTCGATCAGCTGGTGAAACTGAAACTGATGCAAATGGTTACAACCTTAGGTCGGTCCTCACTATTGCATTCCAATTTACCTTTGAGAACCATATGCGAGACAATGTGGCTATGGCTCGTCAGTATGTGCGTAGTGTTGTGGGATCTGTTCAGAGGGTTGCCATGGCTATTGCTCCTTCTCGCCTCAGCACCCAGATGGCGCCAAAGTCACTTCCTGGTTCACCAGAGGCTCTTACTTTAGCAAGATGGATCTGTAGAAGCTACAGGATGCACACTGGTGCAGAGCTTTTTAGAGTTGAGTCCACAGCTGGAGATGCAATCTTGAAGCAACTTTGGCACCATTCAGATGCAATCATGTGCTGTACTGTAAAAACAAATGCATCTCCAGTGTTCACCTTTGCAAACCAGGCTGGACTAGACATGCTTGAAACTACTCTGGTTGCCCTTCAAGATATAATGCTTGACAAAGTTCTTGATGAATCTGGCAGGAAGATTCTTTGCACTGAGTTCTCCAAGATAATGCAACAGGGATTTGCATATCTGCCTGCAGGGATATGTGTATCCAGTATGAATAGGCCAGTGTCCTATGAGCAGGCCATTGCATGGAAGGTTCTCAACGATGATGATTCTAATCACTGCCTAGCTTTCATGTTCATGAACTGGTCTTTTGTTTGA 2541 0.4632 MALSMHKDSSNNQMDSSKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSHLVYENGYMKNQIQTASAATTTDNSCESVVMSGQNQQQNPTQHPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPTKVAEILKDRTSWYRDCRCLDVLSIVPTGNGGTIELMYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLTSSTGGPTGPPPSNFVRAEMLPSGYLIRPCEGGGSIIHIVDHIDLDVWSVPEVLRPLYESSKILAQKLTIAALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLMGNDGVEDVTIAINSSPNKFLGSNYNSSMFPAFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKASPYAVPCARPGGFPSSQVILPLAHTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKSDGPAATRTLDLASTLEVGSGNARSAGETETDANGYNLRSVLTIAFQFTFENHMRDNVAMARQYVRSVVGSVQRVAMAIAPSRLSTQMAPKSLPGSPEALTLARWICRSYRMHTGAELFRVESTAGDAILKQLWHHSDAIMCCTVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKILCTEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIAWKVLNDDDSNHCLAFMFMNWSFV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi168g00086 846 MobiDBLite consensus disorder prediction 1 20 - -
Sebi168g00086 846 ProSiteProfiles START domain profile. 156 357 IPR002913 GO:0008289
Sebi168g00086 846 SUPERFAMILY Bet v1-like 166 377 - -
Sebi168g00086 846 Pfam Homeodomain 18 76 IPR001356 GO:0003677
Sebi168g00086 846 CDD homeodomain 18 78 IPR001356 GO:0003677
Sebi168g00086 846 MobiDBLite consensus disorder prediction 137 158 - -
Sebi168g00086 846 Coils Coil 87 107 - -
Sebi168g00086 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 846 IPR044830 GO:0003700
Sebi168g00086 846 CDD bZIP 70 109 - -
Sebi168g00086 846 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Sebi168g00086 846 Pfam START domain 166 373 IPR002913 GO:0008289
Sebi168g00086 846 SMART START_1 165 375 IPR002913 GO:0008289
Sebi168g00086 846 SMART HOX_1 15 81 IPR001356 GO:0003677
Sebi168g00086 846 Pfam MEKHLA domain 701 845 IPR013978 -
Sebi168g00086 846 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Sebi168g00086 846 CDD START_ArGLABRA2_like 160 376 - -
Sebi168g00086 846 Gene3D - 9 84 - -
Sebi168g00086 846 FunFam homeobox-leucine zipper protein ATHB-15 201 382 - -
Sebi168g00086 846 MobiDBLite consensus disorder prediction 137 157 - -
Sebi168g00086 846 SUPERFAMILY Homeodomain-like 17 80 IPR009057 -
Sebi168g00086 846 SUPERFAMILY Bet v1-like 413 599 - -
Sebi168g00086 846 Gene3D - 199 382 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi168g00086 Sebi-Chr168 1250859 1256586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi168g00086 5 846 Homeobox Transcription Factor Family AT2G34710 79.835 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi168g00086 START 2.8e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi168g00086 K09338 - gmx:100807428 1587.39