Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi168g00063 ATGATTCTGCAATTTGCATTTCATGTGAATATCATCATTTTCATAATATGGCTGATATCTCCACTGGCATCCGCACGAGATTGGATTACATCACAACCTGGTTGTGATTCGTCATGTGGAACAATTGATATCCCTTTCCCATTTGGAATGCAAGATCCAAAATGCTATGCAGATAAATGGTTTGAAATAGAATGCAGAAACAGTACTTCTGAAGGTGAGAAGCCTTACTTGAAGTCTTTAAATCTTGAGGTGAGATATATTTATGTGAGCCTGGGCTTGATTGATGTCATGAATCCAATTACCCATTCGAATTGCCGAACCAATAACAGAAACAAGGCAGGCATAACCTACCTGAGAGGAAGCCCTTTTGTATATTCCCAAGAGGAAAACACATTTGTGGCAGTTGGTTGCAACAATCTTGCTTTTCTGCACTCAAATGGAACAACCGTTGGTGGTTGTGTGTCCATTTGTGATGATAATGAACAAGTGGACAATAACTTTGATTTTGAAAGTGAGGGTTGCCATGGCAGGTACTGTTGCCAGACTTCACTGCCTATGCATCTTTCAGAGTTCAACGCGACACTTGAAGATCTAAGGAGTGGAAGTAGGAGGAATCATACAGAGGAGGAGTGTAGTTATATGATGATTGTAAGTGATGATTGGATCTCGTTCCAGAGTAACTATATGTCTTATTCGGAAGTTGAGAGATTTAGTGAGCTGAAGAACATGGATTATGTTCCAGCGGAGCTTGAGTGGGAGATTTTGAACGAGATGCTCATCAATTCCACTCTGAAACTCCCTTCAGAAGCTCACTGCTATAAGACGAATGTCACATCTTCAGATAACAGATACTCAGGTTGGAGATGTCAGTGCCCCACAGGCTACTATGGCAATCCTTACATCTCTAGAGGCTGCACCGCTATACCAGGGTTCTTTGATAAGAATAATCAGGCGAAGAAGTGGGCTATAGTAGGAGTTTTGTCAAGTCTCGGATCCATCATTTTGCTCTTTGGTCTATGGTTGTTATATAAAGTTGTAAGGAAAAGAATGATAAAGAAACGCAGAGAAAAGTTCTTCAAAAAAAATGGTGGATTGTTGTTACAACAAAGAATGTCTTCTGGAGAAGTTAATGTGGACAGAGCTATTATGTTCAGCCTAAAAGACTTAAAGAAGGCCACTGACAACTTTAATATGAACAGAGTTCTTGGAAAAGGAGGGCAAGGTACTGTTTATAAAGGCATGCTAGTAGATGGTAAAATTGTTGCAGTGAAAAAGTTCAAGGTTGAAGGAAAGATTGAAGAATTCATCAACGAGTTTGTCATTCTTTCACAAATTAACCATAGAAATGTGGTCAAGTTATTAGGATGTTGTTTGGAGACAGAAATTCCCTTGCTTGTTTATGAATTCATTCCCAATGGTAATCTTTTTGAATATTTGCATCACCAAAATGAGGACATACCAATGACATGGGATATGCGTTTGAGAATTGCAACAGAAATTGCAGGAGCTCTATTTTACTTACACTCCATTGCATCTCAACCCATTTATCACAGAGACATCAAATCAACAAATATACTGTTGGATGAAAAGTACAGGGCAAAATTAGCAGACTTTGGAGCATCAAGAATAATTTCCATTGAAGCTACTCATCTCACCACAGTAGTTCAAGGTACTTTTGGATATCTGGACCCAGAATATTTTCATACTAGTCAATTTACAGAAAAAAGTGATGTTTATAGCTTTGGGGTTGTTCTTGCTGAACTTTTAACTAGTCAGAGACCAATATCCTCTGTAAGGTCTGGGGAATCCAAGAATTTAGCTTCATATTTTGTTCAATGTTTGGAGGAGAATAGTCTGTTTGACATTATTGATAAAAGGATTATGAAGGAAGGGGAGAAAGAACATATCTTTGCAGTTGCCAATCTTGCAAATAGATGCTTAGAGTTAAATGGGAAAAAACGACCAACTATGAAAGAAGTGACATTGGAACTAGAAGGGATCCGAGGATTGAATAAGAAGTCTGATGTGCAGCAAGACCATGAAGAAATTGAGCTTGTTGGAATTGAAGACCACCAACCTTGGACTGGATATTCCACATCAAATTCATTGCCAAATCTAAACAGTGGAACGTGGTCCTCAAACTCCAACTCGGAGGTTATACCTATTCTTACATTACAATAA 2181 0.3851 MILQFAFHVNIIIFIIWLISPLASARDWITSQPGCDSSCGTIDIPFPFGMQDPKCYADKWFEIECRNSTSEGEKPYLKSLNLEVRYIYVSLGLIDVMNPITHSNCRTNNRNKAGITYLRGSPFVYSQEENTFVAVGCNNLAFLHSNGTTVGGCVSICDDNEQVDNNFDFESEGCHGRYCCQTSLPMHLSEFNATLEDLRSGSRRNHTEEECSYMMIVSDDWISFQSNYMSYSEVERFSELKNMDYVPAELEWEILNEMLINSTLKLPSEAHCYKTNVTSSDNRYSGWRCQCPTGYYGNPYISRGCTAIPGFFDKNNQAKKWAIVGVLSSLGSIILLFGLWLLYKVVRKRMIKKRREKFFKKNGGLLLQQRMSSGEVNVDRAIMFSLKDLKKATDNFNMNRVLGKGGQGTVYKGMLVDGKIVAVKKFKVEGKIEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLFEYLHHQNEDIPMTWDMRLRIATEIAGALFYLHSIASQPIYHRDIKSTNILLDEKYRAKLADFGASRIISIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLAELLTSQRPISSVRSGESKNLASYFVQCLEENSLFDIIDKRIMKEGEKEHIFAVANLANRCLELNGKKRPTMKEVTLELEGIRGLNKKSDVQQDHEEIELVGIEDHQPWTGYSTSNSLPNLNSGTWSSNSNSEVIPILTLQ 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi168g00063 726 Gene3D Transferase(Phosphotransferase) domain 1 470 691 - -
Sebi168g00063 726 Pfam Wall-associated receptor kinase galacturonan-binding 35 87 IPR025287 GO:0030247
Sebi168g00063 726 FunFam Wall-associated receptor kinase 2 366 469 - -
Sebi168g00063 726 Pfam Protein kinase domain 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi168g00063 726 Gene3D Phosphorylase Kinase; domain 1 363 469 - -
Sebi168g00063 726 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi168g00063 726 SMART serkin_6 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi168g00063 726 CDD STKc_IRAK 402 667 - -
Sebi168g00063 726 SUPERFAMILY Protein kinase-like (PK-like) 382 662 IPR011009 -
Sebi168g00063 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Sebi168g00063 726 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 674 IPR045274 GO:0007166
Sebi168g00063 726 FunFam Wall-associated receptor kinase 2 470 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi168g00063 Sebi-Chr168 822447 825170 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi168g00063 11 706 Receptor kinase-like Gene Family AT1G16260 43.194 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Sebi168g00063 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi168g00063 - - gmx:100798794 966.452