Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi167g00110 | ATGGAGGAGGATGATTGCAATTTGCTTCAACAATGCCACCCCAACTTGCTTGGTGATGAAGAGTTACTTTCTCTTGACATCGCAAGTGCCCTTCACCAACCTTTGTCTTCCGAGAGCTACACTTCTTATCCTCCTGCCTACACTTCCACAGATGAAACCAGACCTCGCAAGCACCACAAAACCCAACATCTTTCCCCTTCTCCATCCCCCTCTGACTCCCCCACCTCCCATCTTCTCTCCTTTGACAACTCAAACTTTTATGGGCTTAACTTTGAGCTTAACCCAAAACATAACGAGGTCGTTTCAGTCTCACCTCCGCCAAATGTGCCTCAAACCCAAAAGGACTCATCACAAGACCAAAACTTTGAAAGTATAATTAATCCACAAGACCAACAAGGGACCAAGAGATCTCCTGCTCACACTCAAGACCACATCATAGCCGAGAGAAAGCGAAGAGAGAAGCTCAGCCAGAGCTTAATTGCTCTTGCAGCTCTTATTCCCGGCTTAAAGAAGATGGACAAGGCTTCAGTTCTAGGAGACGCTATCAAGTACGTGAAAGAGCTCCAAGAGCGTTTGAGGTTACTGGAAGAGCAGAGCAAGAACAGAGAGGTAGCGTCTGTGGTGATGATCAATAAACCAACGCTCATCAGCTGCGACGATCATTCATCCGATGATGGTGGTAATGGGGATGAACCACCGCTCCCCCATGTGGAAGCAAGAGTGTCAGAGAAGGACGTGCTCCTTCGCATCCACTGCCAAAACCAAAAGGGTCTTTTACTCAAAATACTTGCCGAGGTTCAAAACCTTCATCTCTTTGTTGTCAATAGCAGTGTCCTACGCTTTGGGGACGCTATCCTTGACATAACCATTGTTGCTCAGGTTCACACTAGCTAG | 894 | 0.472 | MEEDDCNLLQQCHPNLLGDEELLSLDIASALHQPLSSESYTSYPPAYTSTDETRPRKHHKTQHLSPSPSPSDSPTSHLLSFDNSNFYGLNFELNPKHNEVVSVSPPPNVPQTQKDSSQDQNFESIINPQDQQGTKRSPAHTQDHIIAERKRREKLSQSLIALAALIPGLKKMDKASVLGDAIKYVKELQERLRLLEEQSKNREVASVVMINKPTLISCDDHSSDDGGNGDEPPLPHVEARVSEKDVLLRIHCQNQKGLLLKILAEVQNLHLFVVNSSVLRFGDAILDITIVAQVHTS | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi167g00110 | 297 | SMART | finulus | 145 | 194 | IPR011598 | GO:0046983 | |
Sebi167g00110 | 297 | Gene3D | - | 129 | 190 | IPR036638 | GO:0046983 | |
Sebi167g00110 | 297 | MobiDBLite | consensus disorder prediction | 98 | 120 | - | - | |
Sebi167g00110 | 297 | Coils | Coil | 178 | 205 | - | - | |
Sebi167g00110 | 297 | MobiDBLite | consensus disorder prediction | 64 | 79 | - | - | |
Sebi167g00110 | 297 | MobiDBLite | consensus disorder prediction | 217 | 236 | - | - | |
Sebi167g00110 | 297 | MobiDBLite | consensus disorder prediction | 37 | 79 | - | - | |
Sebi167g00110 | 297 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 142 | 200 | IPR036638 | GO:0046983 | |
Sebi167g00110 | 297 | PANTHER | BHLH TRANSCRIPTION FACTOR | 33 | 295 | - | - | |
Sebi167g00110 | 297 | MobiDBLite | consensus disorder prediction | 104 | 120 | - | - | |
Sebi167g00110 | 297 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 139 | 188 | IPR011598 | GO:0046983 | |
Sebi167g00110 | 297 | CDD | bHLH_AtNAI1_like | 140 | 212 | - | - | |
Sebi167g00110 | 297 | Pfam | Helix-loop-helix DNA-binding domain | 143 | 189 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi167g00110 | Sebi-Chr167 | 1487610 | 1490059 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi167g00110 | 41 | 293 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT4G37850 | 42.647 | 4.40e-56 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Sebi167g00110 | HLH | 2.1e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi167g00110 | - | - | gmx:100816551 | 282.722 |