Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00108 ATGATGGAAATTGCGTCCCCTAACTATTTCCCTGAACTTGGAATGGAGGATCCAACCTTCTTTCATCAATACCCGATGGATTCTTTTGCATGTCCACTCGATGACTTTGACTTGCAGTGTTTCAACTACGAAAGCACACCAAATATTTTCCCTGCTGAAAGTCCTGTTGCCCCTGCAAGGCCAACCAAGAAGCTCAAGATCACTTCCTGCGCCTCCAACCCTGACCTTCCTTCCTCCCAACTTATTTCTTTTGAGCACTTCAATGCACCATCATCAATTCCTTCCCAGCAATTTCACAACCTGGATTCCAATATCAAGCCTAAAATCGAGAATATCGAAGCTCTGATTTCATATGAGGACAAACTTTTCTCAAATCATGATAATCTAGCGAACCACCAGCAGGTTGCCATCACCACAACCAGGAACCCAATCCAAGCTCAAGAACACGTAATAGCCGAAAGAAAACGTAGGGAAAAGCTCAGCCAGAATTTCATCGCTCTTTCCGCCATCGTTCCTGGCCTCAAGAAGATGGATAAGGCTTCTGTGTTGGGAGATGCTATCAAGTATGTGAAACAACTAAAGGAGCGCGTGCAGACTCTGGAGGAACAAGCTGCCAACAAATCGGCAGTACTTGTAAAGAGATCTATTCTGTTTTCAGATGATGATAGCGACGACAGCTATGGAGACCAACCACTCCCTGGAATTGAAGTTAGAGTTTCTGGTAAAGACGTGCTCATCAAGATTCAATGCGATAAACACAGTGGCCGTGCGGCTACTATACTTACTCAATTAGAAAAGCATCATCTCACTGTACAGAGTAGCACCTTCTTGCCCTTCGGGAACAATATTATTGATGTAACTATTGTTGCTCAGATGAACAAGGAAAAATGCATGACAGCTAAGGATCTACTACAAAGCCTACGGCAGGCATTGATTTGA 939 0.4398 MMEIASPNYFPELGMEDPTFFHQYPMDSFACPLDDFDLQCFNYESTPNIFPAESPVAPARPTKKLKITSCASNPDLPSSQLISFEHFNAPSSIPSQQFHNLDSNIKPKIENIEALISYEDKLFSNHDNLANHQQVAITTTRNPIQAQEHVIAERKRREKLSQNFIALSAIVPGLKKMDKASVLGDAIKYVKQLKERVQTLEEQAANKSAVLVKRSILFSDDDSDDSYGDQPLPGIEVRVSGKDVLIKIQCDKHSGRAATILTQLEKHHLTVQSSTFLPFGNNIIDVTIVAQMNKEKCMTAKDLLQSLRQALI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00108 312 Coils Coil 183 210 - -
Sebi167g00108 312 CDD bHLH_AtNAI1_like 146 215 - -
Sebi167g00108 312 SMART finulus 150 199 IPR011598 GO:0046983
Sebi167g00108 312 Gene3D - 136 208 IPR036638 GO:0046983
Sebi167g00108 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Sebi167g00108 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 205 IPR036638 GO:0046983
Sebi167g00108 312 PANTHER BHLH TRANSCRIPTION FACTOR 69 311 - -
Sebi167g00108 312 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00108 Sebi-Chr167 1455170 1456621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00108 2 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.855 7.27e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi167g00108 HLH 5.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00108 - - gmx:100791810 386.726