Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00095 ATGGGTCTTGATCAGGATGCCAACAATAACTCAGGCCTTCACCTTGTTCTAGGGTTATCTTTGACTACTGCAAAGGAAACTACTTCACCTCTATCCTCCACCAAGGCTGATGATCATAATAAGCCAACGCGAATGAAGCCTTTTTCCTCCAACGAGCCTTCGCTAACGTTGGGTCTCTCCGCTGAGAGCTACCTCCCAAAAAATAAGATGAATGGGGGAATAAACAGCAAGCAGGCTTATTATTGTGAGGTCGACCCTCTTCATGACTTATCTAGACAGACTTCTCCTCACAGCGACGTCGTTTCGTCTTTCTCCACTGGGAGGATGGTCAAGAGAGAGAGGGATCTCAGCTGTGAAGAAGTTGAGGTTGAGGCAGATGAGAGGGTTTCTTCAAGAGTGAGTGATGAAGATGAAGACGGCACGAATGCCAGAAAGAAACTCAGGCTTACCAAAGAACAATCTGCACTGCTAGAAGAAAGCTTCAAACAACACAGCACTCTCAATCCTAAACAAAAACAAGCTTTAGCGAGGCAGTTGAATCTACGGCCTCGACAAGTTGAAGTGTGGTTTCAGAATCGGAGAGCCAGAACAAAGCTGAAGCAAACGGAGGTGGACTGTGAGTTCTTAAAGAAATGTTGTGAAACGTTGACTGATGAAAACAGGAGGCTAAAGAAGGAACTGCAAGAGCTGAAGGCACTGAAACTGGCACAGCCTTTGTACATGCCTATGCCTGCAGCTACCCTCACCATGTGCCCTTCTTGCGAGAGGCTCGGTGGTGTTAGTACTGATGCCGCTTCCAATAAAACCCCTTTCACCATCGCTCCCAAGCCTCACTTCTTTAATCCCTTCTCTAATCCTTCTGCAGCATGTTGA 873 0.4685 MGLDQDANNNSGLHLVLGLSLTTAKETTSPLSSTKADDHNKPTRMKPFSSNEPSLTLGLSAESYLPKNKMNGGINSKQAYYCEVDPLHDLSRQTSPHSDVVSSFSTGRMVKRERDLSCEEVEVEADERVSSRVSDEDEDGTNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLKKELQELKALKLAQPLYMPMPAATLTMCPSCERLGGVSTDAASNKTPFTIAPKPHFFNPFSNPSAAC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00095 290 Coils Coil 206 236 - -
Sebi167g00095 290 Pfam Homeobox associated leucine zipper 200 234 IPR003106 GO:0006355|GO:0043565
Sebi167g00095 290 ProSiteProfiles 'Homeobox' domain profile. 140 200 IPR001356 GO:0003677
Sebi167g00095 290 SMART halz 200 243 IPR003106 GO:0006355|GO:0043565
Sebi167g00095 290 ProSitePatterns 'Homeobox' domain signature. 175 198 IPR017970 GO:0000981|GO:0006355
Sebi167g00095 290 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 30 268 - -
Sebi167g00095 290 MobiDBLite consensus disorder prediction 23 54 - -
Sebi167g00095 290 SMART HOX_1 142 204 IPR001356 GO:0003677
Sebi167g00095 290 Gene3D - 148 198 - -
Sebi167g00095 290 CDD homeodomain 144 201 IPR001356 GO:0003677
Sebi167g00095 290 Pfam Homeodomain 144 198 IPR001356 GO:0003677
Sebi167g00095 290 FunFam Homeobox-leucine zipper protein 18 126 205 - -
Sebi167g00095 290 SUPERFAMILY Homeodomain-like 135 201 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00095 Sebi-Chr167 1320869 1322181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00095 1 290 Homeobox Transcription Factor Family AT4G37790 59.076 9.57e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Sebi167g00095 Homeodomain 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00095 K09338 - gmx:100795135 426.017