Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00067 ATGGGGAAGAAGCAGCACAGCAAAGACAGGATGTTCATCACTAAAACCGAATGGGCAACGGAATGGGGAGGCGCCAAATCCAAAGAGAATCGCACCCCTTTCAAACGTCTTCCTTTCTATTGCTGCGCGCTTACATTTACGCCGTTTGAGTATCCAGTTTGCACAGCTGATGGAAGTGTATTCGATGTTATGCACATTACTCCCTATGTTATAAAGTATGGTAAACACCCTGTCACTGGAACTCCGCTGAAGCAGCAAGATCTCATTCCACTAACTTTCCACAAGAATTCAGAAGTAGCAAGTTAA 306 0.4477 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKRLPFYCCALTFTPFEYPVCTADGSVFDVMHITPYVIKYGKHPVTGTPLKQQDLIPLTFHKNSEVAS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00067 101 CDD RING-Ubox_PPIL2 38 98 IPR026951 -
Sebi167g00067 101 SMART Ubox_2 39 101 IPR003613 GO:0004842|GO:0016567
Sebi167g00067 101 Pfam U-box domain 39 91 IPR003613 GO:0004842|GO:0016567
Sebi167g00067 101 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 96 IPR013083 -
Sebi167g00067 101 SUPERFAMILY RING/U-box 37 96 - -
Sebi167g00067 101 ProSiteProfiles U-box domain profile. 35 101 IPR003613 GO:0004842|GO:0016567
Sebi167g00067 101 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00067 Sebi-Chr167 927928 928551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00067 1 98 U-box Gene Family AT5G67530 82.653 1.22e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00067 K10598 - lja:Lj2g3v1968380.2 201.83