Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00064 ATGTTCTTGCCTTCCTTCTGGTACCCTGTACTGGAGGCGAAACTGAGGGTCGCAGTTTTGGTTTCTAAAGCAGCATTTCAATTTATCCAAGGCGCCCAGCTAAGTGATTACAAAGTGCCAGAGGAAGTTAAAGATGCAGGATTTCAAATCTGTGGTGATGAATTAGGGTCTATTGTTGAAGGTCATGATGTAAAGAAGTTCAGATATCACGGTGGGGTTAATGGTGTTGCAGAAAAGCTTTCTACATCAATCACTAAAGGGCTTAGCAATGATCCTGATTCACTGAATAGGAGACAAAGGATATATGGAATCAATAAATTTACTGAAAGTGCAGCTCGGAGTTTCTGGGTTTTTGTTTGGGAAGCTCTCCAAGACATGACTCTCATGATACTTGGAGTGTGTGCTTTTGTGTCTCTGATAGTTGGCATTGCAACGGAAGGATGGCCCAAGGGGGCTCATGATGGTCTTGGAATTGTTGCTAGTATCTTACTGGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAATTCAAGGATTTAGACAAGGAGAAGAAGAAGATATCCATTCAGGTCACAAGGAATGGATATAGGCAGAAAATGTCAATATATGAATTACTTCCTGGTGATATTGTGCATCTTGCCATTGGTGACCAAGTCCCTGCTGATGGACTATTTGTTTCAGGATTTTCTGTGCTGATTGATGAATCAAGTTTAACAGGAGAGAGTGAGCCAGTGGTGGTAAATTCTGAAAATCCTTTTCTTCTTTCTGGAACCAAAGTCCAAGATGGATCATGCAAGATGTTGATTACCACTGTTGGGATGAGGACTCAATGGGGTAAGTTGATGGCTACTCTCAGTGAAGGTGGAGATGATGAAACACCATTACAGGTGAAATTGAACGGAGTGGCAACCATTATTGGGAAGATTGGCCTATTTTTTGCCGTGGTTACTTTTTCAGTTCTGGTGCAAGGACTCATGATGAATGACAAGGCACTTGTCCGACATTTGGCGGCTTGTGAGACCATGGGTTCAGCCACTACTATATGTAGTGACAAGACTGGGACACTAACAACCAATCACATGACTGTTGTGAAAACATGCATTTGCATGAACAGCAAAGAGGTGAGCAATAAGACTTCTAGTTTGTGCTCTGAACTCCCAGAATCTGCTGTGAAACTGTTGCTAGAGTCAATATTTAACAATACAGGAGGAGAGGTTGTGGTTGACAAAGATGGAAAACGTGAGATTCTAGGGACACCAACTGAGACTGCAATTGGAATTTGGCTTGTCATTAGGATGAGTGTAGTGGTACAGCTCCCTGGTGGAGGTTTACGAGCACATTGTAAAGGTGCTTCTGAAATAATTCTGGCTGCTTGTGACAAAGTGCTCAACTCAAACGACCCCATTCCTGCTTCTGGATATACTTGTATAGGAGTTGTTGGTATCAAAGACCCTGTCCGTCCTGGTGTTAAGGAGTCTGTAGCAGTATGCCGTTCAGCTGGAATAACAGTAAGAATGGTTACAGATGATGGCATAGCCATTGAAGGTCCAGATTTTAGAGAAAAGAGTCAGGAAGAGTTGCTTGAACTGATCCCCAAAATTCAGGTTATGGCTCGATCCTCACCTTTAGACAAACATACATTGGTGAAACACCTCCGTACCACGTTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAACGATGCCCCTGCCTTCATGAAGCCGACATTGGACTTGCAATGGGCATTGCTGGAACTGAGTGCAGATGTCATAATTTTGGATGATAACTTCTCCACAATAGTAACAGTGGCCAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTCGTACAGTTCCAGCTGACAGTTAATGTGGTTGCATTAATAGTGAACTTCACATCAGCTTGCTTGACAGGAACTGCTCCTCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACATTGGGAGCACTTGCGCTTGCAACAGAGCCTCCAAATGATGATTTAATGAAGCGTTCACCTGTTGGAAGGAAAGGGAATTTCATCAGCAATGTCATGTGGAGGAATATCTTGGGACAATCACTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAAAGGAAAATCGATCTTTTCACTTGATGGTCCCGATTCGGATCTGGTCTTAAACACACTTATTTTCAACTCATTTGTATTCTGCCAGGTTTTCAATGAGATAAACTCACGTGAGATGGAGAAAATTGATGTTTTTAAAGGCATATTGGATAATTATGTCTTCGTGGGTGTCATCAGTGCTACTGTTTTCTTTCAAATCATTATAGTTGAGTACTTGGGAACCTTCGCAAACACAACACCTCTCACTCTGGCTCAGTGGTTCTTTTCCTTATTAGTTGGATTTATAGGCATGCCTATTGCTGCTCAATTAAAGAAGATCCCTGTCCGAAGCACGTGA 2478 0.4213 MFLPSFWYPVLEAKLRVAVLVSKAAFQFIQGAQLSDYKVPEEVKDAGFQICGDELGSIVEGHDVKKFRYHGGVNGVAEKLSTSITKGLSNDPDSLNRRQRIYGINKFTESAARSFWVFVWEALQDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVVVNSENPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFSVLVQGLMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCICMNSKEVSNKTSSLCSELPESAVKLLLESIFNNTGGEVVVDKDGKREILGTPTETAIGIWLVIRMSVVVQLPGGGLRAHCKGASEIILAACDKVLNSNDPIPASGYTCIGVVGIKDPVRPGVKESVAVCRSAGITVRMVTDDGIAIEGPDFREKSQEELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPAFMKPTLDLQWALLELSADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNILGQSLYQFMVIWFLQSKGKSIFSLDGPDSDLVLNTLIFNSFVFCQVFNEINSREMEKIDVFKGILDNYVFVGVISATVFFQIIIVEYLGTFANTTPLTLAQWFFSLLVGFIGMPIAAQLKKIPVRST 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00064 825 Gene3D - 438 476 IPR023299 GO:0000166
Sebi167g00064 825 PANTHER CATION TRANSPORTING ATPASE 469 822 - -
Sebi167g00064 825 Pfam Cation transporting ATPase, C-terminus 646 819 IPR006068 -
Sebi167g00064 825 SFLD C1.7: P-type atpase like 334 613 - -
Sebi167g00064 825 Gene3D - 477 518 IPR023214 -
Sebi167g00064 825 Pfam Cation transporter/ATPase, N-terminus 69 138 IPR004014 -
Sebi167g00064 825 FunFam Calcium-transporting ATPase 584 824 - -
Sebi167g00064 825 SUPERFAMILY Calcium ATPase, transmembrane domain M 69 823 IPR023298 -
Sebi167g00064 825 Gene3D - 121 325 - -
Sebi167g00064 825 NCBIfam HAD-IC family P-type ATPase 435 647 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi167g00064 825 Pfam E1-E2 ATPase 190 339 - -
Sebi167g00064 825 Gene3D - 362 428 IPR023299 GO:0000166
Sebi167g00064 825 PRINTS P-type cation-transporting ATPase superfamily signature 566 585 - -
Sebi167g00064 825 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Sebi167g00064 825 PRINTS P-type cation-transporting ATPase superfamily signature 503 513 - -
Sebi167g00064 825 PRINTS P-type cation-transporting ATPase superfamily signature 481 492 - -
Sebi167g00064 825 Gene3D - 349 361 IPR023214 -
Sebi167g00064 825 ProSitePatterns E1-E2 ATPases phosphorylation site. 354 360 IPR018303 -
Sebi167g00064 825 SFLD p-type atpase 334 613 IPR044492 -
Sebi167g00064 825 SUPERFAMILY HAD-like 350 666 IPR036412 -
Sebi167g00064 825 Gene3D - 587 825 - -
Sebi167g00064 825 SMART Cation_ATPase_N_a_2 67 143 IPR004014 -
Sebi167g00064 825 Gene3D - 328 348 - -
Sebi167g00064 825 Pfam haloacid dehalogenase-like hydrolase 349 576 - -
Sebi167g00064 825 FunFam Calcium-transporting ATPase 169 289 - -
Sebi167g00064 825 SUPERFAMILY Calcium ATPase, transduction domain A 192 286 IPR008250 -
Sebi167g00064 825 Gene3D - 92 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00064 Sebi-Chr167 888241 891866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00064 12 822 Primary Pumps ATPases AT4G37640 70.010 0.0 1306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00064 K01537 - gmx:547567 1365.52