Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00062 ATGGGTAGCTCTGGCATCTCTTTTTCTTTGTCTAGCCTTATGTGTGAAGAAGGGGAAGATAGCTTCTTTGAAGATGAAGATGAAAACACTTGCATTATTAACTCACTTGATGATGATAACAACACATGTTTTGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAGTCAAGAAAGGGGATTTGGATCCCAGATTCATTTATTGTCCTGTGATGATCATTCAAACAGACACTGGTTATGGAGTGCCCGTTTGGATGCCATTGATTGGATTTTCAATACACAAGCAAAATTTGGGTTCAAAGTTCAGACAGCTTATTTATCAGTGACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATAGATGAATCAAAACCTTGGGCTATTCAATTGTTATCAGTGGCATGTTTATCCCTGGCAGCAAAGATGGAAGAGCAGAGGGTGCCCCCTTTATATGAATATCCAATAGAAGAATATCGCTTTGAGAACAAAGTTATTAAGAACATGGAGCTTATGATTTTGGGTACCTTGGAATGGAAAATGGCATCACCAACTCCTTTTGCTTATTTGCATTACTTTGTTAACAAGTTCTGCCCTGGATCCTCCAGACCAGAAACAATAATCACAAAAGCAATGGAACATATTGTGGCCATGGTTAAAGATGTTAATTTGATGGATCAAAGACCATCCATAATTGCCTCTGCTGCCATATTGGCAGCTTTTGATGCTACATTGACCAAAAAGGCCATGGATCTTCGGATAAACTTAATCTCATCATGGGGAAATATAGAAAGTGGCCATGTATTTTCCTGTTACAATCTCATACAGGGAAAGAGGAGAGACAAAGTTAAGACACCTTCCTCCAATTTATTGTCTACAACACAGTTGAGCTCCACGTGTGTTCTTGAGAACCCATCTAATAACACTTGTTCAGGGGCTAAGAGAAAACTTAGTTATGAGGAGGACAGTGAAAATTGTCCAGGACAAAAGCTACACCGGCTTTAA 1008 0.3889 MGSSGISFSLSSLMCEEGEDSFFEDEDENTCIINSLDDDNNTCFVLEDEEEYIEYLFSQERGFGSQIHLLSCDDHSNRHWLWSARLDAIDWIFNTQAKFGFKVQTAYLSVTYFDRFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQRVPPLYEYPIEEYRFENKVIKNMELMILGTLEWKMASPTPFAYLHYFVNKFCPGSSRPETIITKAMEHIVAMVKDVNLMDQRPSIIASAAILAAFDATLTKKAMDLRINLISSWGNIESGHVFSCYNLIQGKRRDKVKTPSSNLLSTTQLSSTCVLENPSNNTCSGAKRKLSYEEDSENCPGQKLHRL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00062 335 FunFam Cyclin-D5-1 80 183 - -
Sebi167g00062 335 Gene3D - 184 273 - -
Sebi167g00062 335 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Sebi167g00062 335 SMART cyclin_7 90 176 IPR013763 -
Sebi167g00062 335 Gene3D - 79 183 - -
Sebi167g00062 335 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Sebi167g00062 335 PANTHER CYCLINS 45 283 IPR039361 -
Sebi167g00062 335 Pfam Cyclin, N-terminal domain 53 182 IPR006671 -
Sebi167g00062 335 Pfam Cyclin, C-terminal domain 185 280 IPR004367 -
Sebi167g00062 335 SUPERFAMILY Cyclin-like 40 182 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00062 Sebi-Chr167 875198 876593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00062 9 266 Core Cell Cycle Gene Families AT4G37630 35.821 4.51e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00062 K18811 - gmx:100798140 485.723