Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00061 ATGGATGGTATCTACTATTACAAAAGTGGGAGACAATATATGAGGGATAAAGGTTTGCACATTGCAATTGCAAGATATGAACAGCTCACCAAAAAAACCCAATCCCGCAAACTGCATAAGAAAAGCAAGTACGTGAAGACGTTTTATTCACAATACACAGAGGAAGGAACGCTTCAAACATCAATCCAGCATAAACTGACGGCTAACATGGACGGTAACTGTTGTAAATCTCTCCGGAATGCCAAGCAATTCATTCCGTTACCTCCTCCGTTGCCCCATTCAGCAGCAACCGGTTGTCCTTGCAAGTGTCTGGTGACCAATAATTCAGCATCAAGCGGGCACAGTCGCAGTGTCTCTTCATCAACAAGAGATTTGTGGGACCATCTTTTTGATGAAGGTTATAAAGCAGACGTTTGCATCAATACTGATAACGGTGGAATTGTTTATGCTCATTCTAACATTCTTGCCATGGCTTCTCCTGCATTGAGGGGGATGTTGAAGCAAGCAAAGCGTCACAAGAGATGGCGATCAATCTCAATCTTAGGGGTTCCACATGATGCAGTCCGAGTTTTTATTCGATTCCTGTACTCTTCCTGTTATGAGAAGGAAGAAATGGAGGAATTCATCCTACAATTGTTGGTGCTGTCACATGTGTACGTGGTCCCTCATTTGAAGCGTGAATGTGAAGAGAAGCTAGAATTGGGCTACCTCACCATAGATAACGTGGTCGATGTATTTCAACTTGCGTTACTATGTGATGCTCCAAGGCTCAGCCTCATTTGTCACCGTAAGATACTAAAAAACTTTAAAGTTGTTTCGGAATCAGAGGGATGGAAGGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAGTCAGTGATTGATGAAGAAAATAGTAAGAAGGAGAGGATGAGAAAAATCAATGAAAGAGAGATCTATCTGCAATTATACGATGCAATGGAAGCTCTTGTTCACATATGCAGAGATGGTTGTAAAACTATTGGTCCTCATGATAAAGACTTCAAAGCAAATCAACCGTGCAAGTATGCAGCCTGCAAGGGACTAGAATTACTTGTACGTCATTTTGCTGGGTGTAAATTGAGAGTTCCAGGGGGTTGTGTTCATTGCAAGAGAATGTGGCAACTATTGGAGCTGCATTCTCGACTATGTGCTGATCCTGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAGCAGCGAATATCGAAACAAAGCAAGAAAGATGAAATTAGATGGAAAATATTGGTTGAGAAGATATTGAGAACAAGAGGAATTGGGATAGCACCGTGCTTTCGGCCGCAATGA 1335 0.421 MDGIYYYKSGRQYMRDKGLHIAIARYEQLTKKTQSRKLHKKSKYVKTFYSQYTEEGTLQTSIQHKLTANMDGNCCKSLRNAKQFIPLPPPLPHSAATGCPCKCLVTNNSASSGHSRSVSSSTRDLWDHLFDEGYKADVCINTDNGGIVYAHSNILAMASPALRGMLKQAKRHKRWRSISILGVPHDAVRVFIRFLYSSCYEKEEMEEFILQLLVLSHVYVVPHLKRECEEKLELGYLTIDNVVDVFQLALLCDAPRLSLICHRKILKNFKVVSESEGWKAMKQSHPVLEKEVLESVIDEENSKKERMRKINEREIYLQLYDAMEALVHICRDGCKTIGPHDKDFKANQPCKYAACKGLELLVRHFAGCKLRVPGGCVHCKRMWQLLELHSRLCADPDYCRVPLCRNFKQRISKQSKKDEIRWKILVEKILRTRGIGIAPCFRPQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00061 444 FunFam BTB/POZ and TAZ domain-containing protein 3 115 235 - -
Sebi167g00061 444 FunFam BTB/POZ and TAZ domain-containing protein 2 310 434 - -
Sebi167g00061 444 Gene3D Potassium Channel Kv1.1; Chain A 105 235 IPR011333 -
Sebi167g00061 444 SMART BTB_4 136 236 IPR000210 GO:0005515
Sebi167g00061 444 SMART TAZ_2 313 405 IPR000197 -
Sebi167g00061 444 Pfam BTB/POZ domain 128 232 IPR000210 GO:0005515
Sebi167g00061 444 Gene3D - 237 310 - -
Sebi167g00061 444 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 107 436 IPR044513 -
Sebi167g00061 444 Gene3D TAZ domain 311 432 IPR035898 -
Sebi167g00061 444 SUPERFAMILY POZ domain 116 232 IPR011333 -
Sebi167g00061 444 SUPERFAMILY TAZ domain 313 413 IPR035898 -
Sebi167g00061 444 CDD BACK 238 298 - -
Sebi167g00061 444 FunFam BTB/POZ and TAZ domain-containing protein 2 238 308 - -
Sebi167g00061 444 ProSiteProfiles BTB domain profile. 136 204 IPR000210 GO:0005515
Sebi167g00061 444 Pfam TAZ zinc finger 321 404 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00061 Sebi-Chr167 860390 867279 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Sebi167g00061 BTB 2.6e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00061 - - lja:Lj2g3v1968190.1 664.84