Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00050 ATGAGTTGCAACGGTTGCCGAGTCCTTCGAAAGGGTTGCAGCGAGTCCTGTATCTTGCGCCCTTGTCTTCAGTGGATCGACACCCCTGAAGCTCAAGGCCATGCCACTGTCTTTGTAGCCAAATTCTTCGGCCGTGCAGACCTCATGTCCTTCATTTCCAACGTCCCTGAACCCCAAAGACCTGCTCTGTTTCAATCTCTGTTGTTCGAAGCGTGTGGACGAACGGTGAACCCTGTGAACGGTGCCGTGGGGCTTTTATGGACTGGAAACTGGCACGTGTGCCAGGCGGCGGTTGAGACGGTGCTCCGTGGCGGCACCCTGAGACCTATGCCGGAGCTCCTTGGTTTAGACGCTCCCACTCCCACCGCCGACGACGCGTCTGAAGGGGAAGTCACATGTAACGACATGTGGAGGGTCCGAGATCCGAATCCGAATTTACGGTTCACACACTCGCGGTCTAATAAGGTCGCTTCCGGCGGTAAACGCAAGCGATCGGATGAACTAGCCAAGCTTCAGACCACGGCTGATCTCAATCTCCGGCTGACACCGAGTTTCCTGCAGAACGTGTCGTCCTATGGCTGCCGACGAGAAATTCGCCGGCCGGGATCGCCGTCGATGAATTCAGAGGAATCCGTGACTACGGCGACGTGCTTGGAGACCAGGATCGGAGATCACTACGCTCACGACGCAGACCGGAAAGTGCTCAACCTTTTCATTTGA 720 0.5625 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELLGLDAPTPTADDASEGEVTCNDMWRVRDPNPNLRFTHSRSNKVASGGKRKRSDELAKLQTTADLNLRLTPSFLQNVSSYGCRREIRRPGSPSMNSEESVTTATCLETRIGDHYAHDADRKVLNLFI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00050 239 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Sebi167g00050 239 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Sebi167g00050 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00050 Sebi-Chr167 684697 685508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00050 1 238 AS2 family AT3G49940 55.469 5.98e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi167g00050 LOB 6.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00050 - - gmx:100816189 443.351