Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00036 ATGTTGGAGCTGTGCCGCAGGCCACTGCAGATGTGCTTTTGTGGTGGAAGCAACAATGATGAGCTCTTGTGGCACGTGGATTTGAAACCCCATGCCTCAGGAGACTATTCAATTGCAGTGGTACAAGCTAATGCCTCAGGAGACTATTCAATTGCAGTGGTACAAGCTAATTCCTCCTTGGAAGACCAAGGACAAGTCTTCACCTCTCCAGCCGCAACTTTTGTTGGCGTATACGACGGCCATGGTGGACCCGAAGCTTCCCATTTCATCACCAACCATCTCTTCTCCTTCCTTTGCAAGTTCGCTTCAGAGGAAGGTGGTTTGTCAGAGCAAGTGATAAAGAAGGCCTTCAATGCAACTGAAGAGGAGTTCTTAAATTTAGTGAGGCAATCTTGGACTGCACAGCCACATATTGCTTCAGTGGGTTCTTGTTGTCTCTTGGGAGCGATTTCAAATGATGTTCTTTATGTTGCTAATCTCGGGGATTCGAGAGCGGTTCTGGGTCGGAAAGCATTGGAAGGACAGGTAAATTGTGCTCCTGTGGTGGCAGAGCGTTTGTCCACGGATCATAATGTTGGAGTGGAGGAGGTCAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGAACACATTGTGGTTCACAATCATGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAGAAACCAGATTTTGACAATAATCCTTTGTTCCGGCAATTTGTATGTCCGGTACCTTTAAAGAGACCCGTAATGACAGCAGAACCATCGATATTGACGCCGAAGTTGAGAGCAGAAGATATGTTTTTGATCTTTGCATCAGACGGACTTTGGGAACATTTAACCGATGAAGCGGCTGTTGAAATCATATTCAGAAGTCCAAGAATAGTAAGCATCCACCAAACAAATTAA 939 0.4526 MLELCRRPLQMCFCGGSNNDELLWHVDLKPHASGDYSIAVVQANASGDYSIAVVQANSSLEDQGQVFTSPAATFVGVYDGHGGPEASHFITNHLFSFLCKFASEEGGLSEQVIKKAFNATEEEFLNLVRQSWTAQPHIASVGSCCLLGAISNDVLYVANLGDSRAVLGRKALEGQVNCAPVVAERLSTDHNVGVEEVRKEVEALHPDDEHIVVHNHGVWRIKGIIQVSRSIGDVYLKKPDFDNNPLFRQFVCPVPLKRPVMTAEPSILTPKLRAEDMFLIFASDGLWEHLTDEAAVEIIFRSPRIVSIHQTN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00036 312 CDD PP2Cc 55 307 IPR001932 -
Sebi167g00036 312 ProSiteProfiles PPM-type phosphatase domain profile. 48 312 IPR001932 -
Sebi167g00036 312 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Sebi167g00036 312 PANTHER PROTEIN PHOSPHATASE 49 303 IPR015655 GO:0004722|GO:0006470
Sebi167g00036 312 Pfam Protein phosphatase 2C 71 299 IPR001932 -
Sebi167g00036 312 SUPERFAMILY PP2C-like 55 301 IPR036457 -
Sebi167g00036 312 Gene3D - 32 307 IPR036457 -
Sebi167g00036 312 SMART PP2C_4 38 306 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00036 Sebi-Chr167 481093 484743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00036 18 304 PP2C-type Phosphatase Gene Family AT3G51370 49.153 1.42e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00036 - K01102 gmx:100802394 492.656