Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00016 ATGGCTCAACCCCAACAACGCTCTCCCTCACTCCTCTGTGATGAAGAACAACTCACTTTTGAGGAGGAAGATTCTGGAGAGAGTGACCCCCATGTCTCAAAGCCCCCAACTTTACCTATAACATTGCTCGAGGAGGGACACGATGACCTCCTCTCTCTAATCTCCAAAGAGAAAAGCACCCATTTCTATTTCACTACCAATGGGACTCTAACTCTTCTTGGGGGTACTCACAACGACGCCGTGCGCTGGATTTCTAGAGTTTCTGCCTTCTATGGTTTCTCTGCTTCAACAACTGTTCTTGCCGTCAACTACTTTGGTAGGTTCGTAACAAGCCTAAGCTTTCAATGGGATAAGCCATGGGTGACTCAGCTCACTGCAGTTGCTTGTGTTTCTCTTGCTGCCAAAATGGAGGAGACCCATGTCCCACTTCTTTTGGAGCTGCAAGTGGCAGAATCAGAGTTCTTGTTTCAACCAAAGACCATACAGAGGATGGAGCTCCTCGTGTTGTCCACTCTTGAGTGGAGGATGAACCCTGTGACCCCAATTTCCTTCTTTCACCACTGTGTCAGAAGGCTTGGTTTAAAGAGTCCCTTGCATTGGGAGTTTCTGAGTAGTTGTGAACAAGTTCTTCTCTGTGTCATTGCGGATTCAAAGGTTATGAGTTATCTTCCTTCTACACTGGCTGCTGCTATAATGATCCATGTCATTAAAGAGATTGAACAATTTAATACACCGGAATACAAAAATCAGCTTGCAAATTTACTCAGAGTTTGTGAGGAAGAAGTGAATGGATGCTACAAATTCATGGTGAAACGATTAGTTTGTGATGAAGGCGTTCGCAATCTTGGCCAAAAACGCAAACGCCTATCTGAACCAAGTAGCCCTGGTGGGGTCATTGATGCATGTTTCAGCTGTGAAAGCTCAAATTCAAATGAGTCATCACTTTCACTGGAGGAGCTAGTGTCTGAGAGGGCTTCTCGTGATGATCTAAATAGTCCTCGTTAA 1005 0.4507 MAQPQQRSPSLLCDEEQLTFEEEDSGESDPHVSKPPTLPITLLEEGHDDLLSLISKEKSTHFYFTTNGTLTLLGGTHNDAVRWISRVSAFYGFSASTTVLAVNYFGRFVTSLSFQWDKPWVTQLTAVACVSLAAKMEETHVPLLLELQVAESEFLFQPKTIQRMELLVLSTLEWRMNPVTPISFFHHCVRRLGLKSPLHWEFLSSCEQVLLCVIADSKVMSYLPSTLAAAIMIHVIKEIEQFNTPEYKNQLANLLRVCEEEVNGCYKFMVKRLVCDEGVRNLGQKRKRLSEPSSPGGVIDACFSCESSNSNESSLSLEELVSERASRDDLNSPR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00016 334 Pfam Cyclin, C-terminal domain 179 280 IPR004367 -
Sebi167g00016 334 SUPERFAMILY Cyclin-like 45 177 IPR036915 -
Sebi167g00016 334 CDD CYCLIN_AtCycD-like_rpt1 78 174 - -
Sebi167g00016 334 CDD CYCLIN_AtCycD-like_rpt2 179 269 - -
Sebi167g00016 334 SMART Cyclin_C_2 179 306 IPR004367 -
Sebi167g00016 334 Gene3D - 178 267 - -
Sebi167g00016 334 PANTHER CYCLINS 53 271 IPR039361 -
Sebi167g00016 334 FunFam CYCLIN D32 178 267 - -
Sebi167g00016 334 MobiDBLite consensus disorder prediction 308 334 - -
Sebi167g00016 334 FunFam D6-type cyclin 61 177 - -
Sebi167g00016 334 Pfam Cyclin, N-terminal domain 76 177 IPR006671 -
Sebi167g00016 334 SMART cyclin_7 82 170 IPR013763 -
Sebi167g00016 334 MobiDBLite consensus disorder prediction 1 38 - -
Sebi167g00016 334 Gene3D - 78 177 - -
Sebi167g00016 334 SUPERFAMILY Cyclin-like 161 274 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00016 Sebi-Chr167 189586 190891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00016 27 311 Core Cell Cycle Gene Families AT5G67260 47.735 1.43e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00016 K14505 - gmx:100785030 355.14