Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00014 ATGGAACCAGCAGCTGCGGACTCCTCATCTCAACCTACTCCTCCAGCTTCTAATACCGAACATCACTCCACCAAAGTAACTTCGCCAATTGGGAATGCACATGATTCACCATCGTTGTCACCCACTGCTGGCATACCATCCTGGGCAAGAAATCTGAAACTCCCACAGTCCCTTGGGCTTGGGGCAGCACAACAGGACTCACAAACTGAAACTAATGGCATGTCAGCTTTTGCCCGCTTGACTAGTGGACTTGGATTACGAGTGCCCTCAAATGAGACTTCTCCAACCAATGCAGGAGCTGAGCAACCTAATTTAATTGAATCATTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTAAAGGCTGTGCAGACCAAAGCACGCCATATTGTCTCTCAAAATAAACGAAGATACCAGGTTCTTTATATTCTATTAAAAAAGGAAGGTGGATTTGATTTGGATATGGCATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTCGGATACATTGAGGGTTTCTATCGCAATCACATGGAAGAAGTAATCAAGTTTTTTGAAACTCATCATAAGGGTAAGTACAAAGTATACAATCTTTGTTCAGAGAGGTTGTATGATGGATCACTATTCCAGGGGAAGGTTGCAAGCTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCACATTCATGGTTGAAGGAGGATATTCAGAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACAGGACTGATGGTTTGTTGTCTTCTTTTGTTTCTTAAGTTCTTCCCAACTGCAGAGGAAGCTATTGATTACTTTAACCAGAAAAGATGTGTAGATGGAAAGGCTCTAGTTCTCCCTAGTCAGATTAGATATGTCAAATACTTTGAACGGACTTTAACGCACTTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATGCTAAGAGGGTTTCGGCTTCACAAATGCCCTTATTGGGTTAGACCATCCATTACAATATCTGATCATAGTGGAATTCTTTTCACAACAAGAAAGCATCCCAAAACAAAGGATCTAATGCCGGAAGATTTCTGGATCAGTGCACCGAAGAAAGGAATTGTGGTCTTTGCATTACCAGGGGAGCCTGGTCTGACAGAGTTGGTTGGGGACTTCAAAATTCATTTTCATGACCGACAGGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAATCGAAAAATTTTAGATGGCTCAGATTTTGATGATTTTGACAAGAGAAAGATCCCTGCTCCAGGGTTCCAGGTCGAAATTGTGATGGTAGACTATAATGGCACCCTACCTGCAAGGACAAAAGCCAATCCTGTAAGCAAAGGATCTGACGGCAACACAAGCAATGACCTAGCAGGTGCAAGGCCTACATCTAATTCAAGTGATAGTAAGGGTCCTGGAAATGGAGATGATGATGTATTCTCGGATAGTGACGAAGAGGAGACCAAGGGAACACAAAGGAGGGAAACTGCAACTGAGTACGCACCTCATCAAGTATCTGAGGCCACTACAGCCCATGTAGGGATGTTGGCACATAAAACGGATCAGTTGTCACTCCAGCATGAGGAACACACACAAAACAATTCTTCTCAAGAATCAACTGCAAATAAAATTCATAAAATCCATGCAGGCCCTAACACCACTAACATGGAATCTGTGGGGGCTAATGATATCAAAGCAATTGCAGCAGATGCTTCAGTTTTTTCTTTTGGTGATGAAGATTTTGAGAGTGATTGA 1833 0.425 MEPAAADSSSQPTPPASNTEHHSTKVTSPIGNAHDSPSLSPTAGIPSWARNLKLPQSLGLGAAQQDSQTETNGMSAFARLTSGLGLRVPSNETSPTNAGAEQPNLIESFTKGLMDSSKSAVKAVQTKARHIVSQNKRRYQVLYILLKKEGGFDLDMAYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVASFPFSDHNCPPIQLIASFCQSAHSWLKEDIQNVVVVHCKAGMGRTGLMVCCLLLFLKFFPTAEEAIDYFNQKRCVDGKALVLPSQIRYVKYFERTLTHFNGEVQPGRRCMLRGFRLHKCPYWVRPSITISDHSGILFTTRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLTELVGDFKIHFHDRQGDFYCWMNTTMTENRKILDGSDFDDFDKRKIPAPGFQVEIVMVDYNGTLPARTKANPVSKGSDGNTSNDLAGARPTSNSSDSKGPGNGDDDVFSDSDEEETKGTQRRETATEYAPHQVSEATTAHVGMLAHKTDQLSLQHEEHTQNNSSQESTANKIHKIHAGPNTTNMESVGANDIKAIAADASVFSFGDEDFESD 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00014 610 SMART PTEN_C2_2 329 457 IPR014020 -
Sebi167g00014 610 ProSiteProfiles C2 tensin-type domain profile. 331 458 IPR014020 -
Sebi167g00014 610 MobiDBLite consensus disorder prediction 553 582 - -
Sebi167g00014 610 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 158 324 IPR029021 -
Sebi167g00014 610 MobiDBLite consensus disorder prediction 465 532 - -
Sebi167g00014 610 CDD PTP_PTEN 155 319 IPR045101 GO:0016791
Sebi167g00014 610 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 122 327 - -
Sebi167g00014 610 ProSitePatterns Tyrosine specific protein phosphatases active site. 261 271 IPR016130 GO:0016311|GO:0016791
Sebi167g00014 610 MobiDBLite consensus disorder prediction 1 46 - -
Sebi167g00014 610 Pfam Protein-tyrosine phosphatase 231 283 IPR000242 GO:0004725|GO:0006470
Sebi167g00014 610 MobiDBLite consensus disorder prediction 548 582 - -
Sebi167g00014 610 ProSiteProfiles Phosphatase tensin-type domain profile. 145 324 IPR029023 -
Sebi167g00014 610 Gene3D Protein tyrosine phosphatase superfamily 122 327 IPR029021 -
Sebi167g00014 610 MobiDBLite consensus disorder prediction 1 45 - -
Sebi167g00014 610 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 569 - -
Sebi167g00014 610 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 259 298 IPR000387 GO:0016311|GO:0016791
Sebi167g00014 610 MobiDBLite consensus disorder prediction 465 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00014 Sebi-Chr167 152951 159185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00014 8 610 Protein tyrosine phosphatase (PTP) family AT3G19420 58.506 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00014 K01110 - gmx:100801622 1032.71