Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi167g00010 ATGGCCGTGGAGCTTATGATGGGCTACAGGAATGACAATTTTGCGGCCAATTTCGAAGAAAATGCTGTTCAAGAAGCTGCCTCTGGGTTAGAGAGCGTGGAGAAGCTCATCAGGTTGCTATCACAGACTCAGCAACAACACAAGTCATCTCCAAAGTCTTCCATGGAAATTGAGTTGGACTATAAAGCTGTTGCTGACGTCGCTGTTTCAAAGTTCAAGAAGGTGATTTCACTTCTGGGTAGAACCAGAACCGGTCATGCTCGATTCAGAAGAGCCCCTTTAGCTCCTCCCTCTTCTTCCGTTAACCAAAACCTTGAAACACCTTGTGAACCCAGAGTCTATCATGCTACTCCGTTGCAGCAGATCCCACCACCAACCCTTCAAACACACAGTGAACATAATCACCCTTTGATCCCAAACAGAAAGGACTCCTCAAAGACCATTACTTTCTCCTATTCCTCTGCTGCCAATTCGTTCATGTCATCCCTCACCGGCGACGCTGACACCAAACACCCTGGTTCATCCTCGCCGGCGACGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCGTCAGGAAAGCCTCCTCTTTCTTCGTGTTCTTTGAAGAGAAAGTGTAGCTCTGAGAACTTGGGTTCTGCCAAGTGCGGCAGTTCCTCCAGTCGCTGCCATTGTTCAAAGAAGAGAAAAATGAGGTTGAAGAGAGTGGTGAGGGTACCAGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTACTCTTGGAGGAAATACGGACAGAAACCTATTAAAGGATCCCCTCATCCAAGGGGTTATTACAAGTGTAGCAGCGTGAGAGGGTGTCCAGCGCGGAAACACGTAGAGAGAGCTGTGGATGATCCATCTATGTTGGTAGTGACCTATGCCAGTTGGAATTATGAAGAATTGCAGTACAGTACTCCTGTGGGAGGCAAAGTCAAAATGAGTGGGTGTGGAATGGAATTGATAAGCTCTGGTCTGGCAATGAAGGGTCCTACCTGCCTCGTTCGCAAATTTGCTCATTTGTTTCCTTTGCCTTAA 1062 0.4736 MAVELMMGYRNDNFAANFEENAVQEAASGLESVEKLIRLLSQTQQQHKSSPKSSMEIELDYKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLAPPSSSVNQNLETPCEPRVYHATPLQQIPPPTLQTHSEHNHPLIPNRKDSSKTITFSYSSAANSFMSSLTGDADTKHPGSSSPATPFQITNLSQVSSSGKPPLSSCSLKRKCSSENLGSAKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPSMLVVTYASWNYEELQYSTPVGGKVKMSGCGMELISSGLAMKGPTCLVRKFAHLFPLP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi167g00010 353 FunFam WRKY transcription factor 65 234 310 - -
Sebi167g00010 353 SMART WRKY_cls 250 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi167g00010 353 Pfam WRKY DNA -binding domain 252 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi167g00010 353 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 303 IPR044810 GO:0003700
Sebi167g00010 353 SUPERFAMILY WRKY DNA-binding domain 247 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi167g00010 353 Pfam Plant zinc cluster domain 203 248 IPR018872 -
Sebi167g00010 353 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi167g00010 353 Gene3D WRKY domain 229 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi167g00010 Sebi-Chr167 124174 125668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi167g00010 19 302 WRKY Transcription Factor Family AT2G24570 46.205 8.84e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi167g00010 WRKY 1.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi167g00010 - - qsa:O6P43_024608 432.95